Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq4666 75.2 5e-12
seq5081 71.6 6e-11
seq3082 71.6 6e-11
seq2905 71.6 6e-11
seq2298 71.6 6e-11
seq1224 71.6 6e-11
>seq4666
Length=16983
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||| |||||||| || |||||||||| ||||||||||||||||| |||| ||||||||
Sbjct 13226 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGTGAACCGGGATCAGCCCAGC 13284
>seq5081
Length=14249
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||| |||||||| || |||||||||| |||||||||||| |||| |||| ||||||||
Sbjct 869 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 927
>seq3082
Length=3087
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||| |||||||| || |||||||||| |||||||||||| |||| |||| ||||||||
Sbjct 1065 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 1007
>seq2905
Length=45512
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||| |||||||| || |||||||||| |||||||||||| |||| |||| ||||||||
Sbjct 6068 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 6126
>seq2298
Length=78726
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||| |||||||| || |||||||||| |||||||||||| |||| |||| ||||||||
Sbjct 38517 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 38459
>seq1224
Length=3583
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||| |||||||| || |||||||||| |||||||||||| |||| |||| ||||||||
Sbjct 1026 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 1084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230384320560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |