Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4666 75.2 5e-12 seq5081 71.6 6e-11 seq3082 71.6 6e-11 seq2905 71.6 6e-11 seq2298 71.6 6e-11 seq1224 71.6 6e-11 >seq4666 Length=16983 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || |||||||||| ||||||||||||||||| |||| |||||||| Sbjct 13226 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGTGAACCGGGATCAGCCCAGC 13284 >seq5081 Length=14249 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || |||||||||| |||||||||||| |||| |||| |||||||| Sbjct 869 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 927 >seq3082 Length=3087 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || |||||||||| |||||||||||| |||| |||| |||||||| Sbjct 1065 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 1007 >seq2905 Length=45512 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || |||||||||| |||||||||||| |||| |||| |||||||| Sbjct 6068 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 6126 >seq2298 Length=78726 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || |||||||||| |||||||||||| |||| |||| |||||||| Sbjct 38517 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 38459 >seq1224 Length=3583 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || |||||||||| |||||||||||| |||| |||| |||||||| Sbjct 1026 GGAGAAGAAACTTACGAGGATTCCCTTAGTAACGGCGAGCGAACCGGGATCAGCCCAGC 1084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230384320560