Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq3 149 1e-33 seq1035 127 4e-27 seq1041 78.8 2e-12 >seq3 Length=30470407 Score = 149 bits (164), Expect = 1e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34 AATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCC 93 || || |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 688760 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCT 688819 Query 94 GTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTA 153 | ||| |||||| | || ||||| |||| ||| |||||| ||||||| ||||||||||| Sbjct 688820 GATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTA 688879 >seq1035 Length=594915 Score = 127 bits (140), Expect = 4e-27 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||| ||| ||||| |||||| Sbjct 2102 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCAGCCCCCCGTGGGAGTCC 2161 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||| ||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 2162 GGGCCCTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 2221 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 2222 CTTGGTTAGCCTTTACCTGACCAACTACCTAAT 2254 >seq1041 Length=564860 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 74 GTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTG 133 |||||||||||| |||||| | ||| | || || ||||| |||| ||| |||||| Sbjct 504919 GTCTCAGTCCCAGTGTGGCTGATCATCTGAAAAGACCTGCTACTGATCATCGCCTTGGTA 504860 Query 134 GGCTATTATCTCACCAACTACCTAATCGGCCGC 166 ||||||| ||||||||||| |||||| | ||| Sbjct 504859 AGCTATTACCTCACCAACTAGCTAATCAGACGC 504827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998327526144