Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq1035 102 1e-19
>seq1035
Length=594915
Score = 102 bits (112), Expect = 1e-19
Identities = 199/289 (69%), Gaps = 10/289 (3%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| |||||||| ||||||||||||| ||| | | |||||||| ||| |
Sbjct 1745 CCCATGCTTTCGCACCTCAGCGTCAGTAGGGACCCAAAGAGCTGCCTTCGCTTTTGGCCT 1804
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| |||| ||||||| |||| ||| ||||||||| ||| | ||||| |||
Sbjct 1805 TCCTTCGTAGATCTACGGATTTAACCCCTACACACGAAATGAAACTCTCCTCTGTCTCAC 1864
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTT----GAGCCCATAGTTTTCACATCT 176
||||| || ||||| | ||| | |||| | | | | || || | |
Sbjct 1865 TCAAGTGAATTGGTTTCGAGAGCATTCCGCCGGTTTTTGGCGACTTGAACTTGCA-ACCC 1923
Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236
|| | | | ||| || ||||||||| || | | | |||| | ||| |||||| ||
Sbjct 1924 GATTCAC--TGCCG--TAGT-GCCCTTTACGCCTAGTCATTCCGAAGAACACTTGCCCCC 1978
Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
|||||||||||||||||||||||| |||| |||| ||||| ||||||
Sbjct 1979 CCCGTATTACCGCGGCTGCTGGCACGGAGTTTGCCGGGGCTTCTTCCTC 2027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828741717489
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |