Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855. 2_202012-11-14] 7,259 sequences; 472,231,289 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq5789 199 6e-49 >seq5789 Length=6742 Score = 199 bits (220), Expect = 6e-49 Identities = 184/233 (79%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 ||||||||| ||| || ||| |||||| ||||| ||| ||||| ||||| ||| | Sbjct 2445 AACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGACCCAAC 2504 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 || ||||||||||||||||| ||||||| || | ||| || || ||| ||| Sbjct 2505 CCAGTCCTCTCGTACTAAGGTTGGCTCCTCGCAGTTATCCCTTTAACACCAACGGTAGAT 2564 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| ||||||||||||| ||||||||| |||||| ||| ||| || |||| || |||||| Sbjct 2565 AGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTGATCGGCGAA 2624 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 2625 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 2677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780745092924