Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musa_20acuminata_20subsp._20malaccensis_20[refseq_20GCF_5F000313855.
2_202012-11-14] 7,259 sequences; 472,231,289 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq5789 199 6e-49
>seq5789
Length=6742
Score = 199 bits (220), Expect = 6e-49
Identities = 184/233 (79%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106
||||||||| ||| || ||| |||||| ||||| ||| ||||| ||||| ||| |
Sbjct 2445 AACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGACCCAAC 2504
Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162
|| ||||||||||||||||| ||||||| || | ||| || || ||| |||
Sbjct 2505 CCAGTCCTCTCGTACTAAGGTTGGCTCCTCGCAGTTATCCCTTTAACACCAACGGTAGAT 2564
Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222
||| ||||||||||||| ||||||||| |||||| ||| ||| || |||| || ||||||
Sbjct 2565 AGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTGATCGGCGAA 2624
Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| || |||||||||||||| ||||| |||||||||| || ||| ||||||||
Sbjct 2625 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 2677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780745092924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |