Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1607 73.4 8e-11 >seq1607 Length=65845 Score = 73.4 bits (80), Expect = 8e-11 Identities = 104/144 (72%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA--TGG 250 ||| ||||||| |||||| ||| ||||||||||||| | | | || | | ||| Sbjct 11665 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGA-GAGCTCACACAGGCCTTGG 11607 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| | || | ||| | |||||||| | || |||||||||||||| Sbjct 11606 AGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGC 11547 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||| ||| | ||| |||||| || Sbjct 11546 CAACCAAGATCGGATATAGCTGGT 11523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972523578880