Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq110 230 6e-58 seq838 226 7e-57 seq692 185 2e-44 seq598 167 6e-39 >seq110 Length=548158 Score = 230 bits (254), Expect = 6e-58 Identities = 297/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 540389 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 540448 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 540449 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 540508 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 540509 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 540568 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 540569 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 540628 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 540629 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 540688 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 540689 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 540748 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 540749 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 540797 >seq838 Length=133837 Score = 226 bits (250), Expect = 7e-57 Identities = 296/409 (72%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 52191 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 52132 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 52131 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 52072 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 52071 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 52012 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 52011 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 51952 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 51951 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 51892 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| ||| |||| ||||| | || | | | Sbjct 51891 GATTAGATACCCCAGTAGTCCTAGCCGTAATCGATGGATACTAGGCGCTGTGCGTATCGA 51832 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 51831 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 51783 >seq692 Length=163528 Score = 185 bits (204), Expect = 2e-44 Identities = 243/333 (73%), Gaps = 8/333 (2%) Strand=Plus/Plus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||||||| ||| ||||| | Sbjct 8580 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGGGCAAGTG 8639 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGA---CAGGTGTGA 124 || ||||||| ||| ||||||||| | || ||||||| | | | || || | | Sbjct 8640 TTCTTCGGAATGACTAGGCGTAAAGGGCACGTAGGCGGT-GAATCGGGTTGCAAGT-TCA 8697 Query 125 AATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGG 184 | || || |||| | | | ||| | | || ||| ||||| | |||||| Sbjct 8698 AGTCGCCAAA---AACCGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGG 8754 Query 185 GGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCG 244 | || ||| | |||||| ||||||| ||||||| | | ||||| |||| ||| Sbjct 8755 AGAGTTTCATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAAGGCCAAAAGCG 8814 Query 245 AAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 304 |||||||| | |||| ||||||||| | | ||||||| |||||||||||| ||| Sbjct 8815 AAGGCAGCTCTTTGGGTCCCTACTGACGCTGAGGTGCGAAAGCATGGGGAGCAAACTGGA 8874 Query 305 TTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||| ||||||||| ||| |||||||| Sbjct 8875 TTAGATACCCAGGTAGTCCATGCCGTAAACGAT 8907 Score = 185 bits (204), Expect = 2e-44 Identities = 243/333 (73%), Gaps = 8/333 (2%) Strand=Plus/Plus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||||||| ||| ||||| | Sbjct 14501 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGGGCAAGTG 14560 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGA---CAGGTGTGA 124 || ||||||| ||| ||||||||| | || ||||||| | | | || || | | Sbjct 14561 TTCTTCGGAATGACTAGGCGTAAAGGGCACGTAGGCGGT-GAATCGGGTTGCAAGT-TCA 14618 Query 125 AATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGG 184 | || || |||| | | | ||| | | || ||| ||||| | |||||| Sbjct 14619 AGTCGCCAAA---AACCGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGG 14675 Query 185 GGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCG 244 | || ||| | |||||| ||||||| ||||||| | | ||||| |||| ||| Sbjct 14676 AGAGTTTCATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAAGGCCAAAAGCG 14735 Query 245 AAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 304 |||||||| | |||| ||||||||| | | ||||||| |||||||||||| ||| Sbjct 14736 AAGGCAGCTCTTTGGGTCCCTACTGACGCTGAGGTGCGAAAGCATGGGGAGCAAACTGGA 14795 Query 305 TTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||| ||||||||| ||| |||||||| Sbjct 14796 TTAGATACCCAGGTAGTCCATGCCGTAAACGAT 14828 >seq598 Length=182560 Score = 167 bits (184), Expect = 6e-39 Identities = 215/297 (72%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| || |||||| ||||||||||||||||||| || ||| ||| Sbjct 140233 TATCTGAGGAATAAGCATCGTCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 140292 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | ||||||||| |||| | ||| || | | || | | || Sbjct 140293 AAGCGTTATCCGGAATGATTGGGCGTAATGCGTCTGTAGGTGGCTTTTCAAATCCGTCGT 140352 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 140353 CAAATCCCAGGGCTCAACCCTGGACAGGCGATGGAAACTACCAAGCTGGAGTACGGTAGG 140412 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 140413 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 140472 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| Sbjct 140473 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAA 140529 Score = 141 bits (156), Expect = 2e-31 Identities = 180/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| || |||||| ||||||||||||||||||| || ||| ||| Sbjct 136728 TATCTGAGGAATAAGCATCGTCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 136787 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | ||||||||| |||| | ||| || | | || | | || Sbjct 136788 AAGCGTTATCCGGAATGATTGGGCGTAATGCGTCTGTAGGTGGCTTTTCAAATCCGTCGT 136847 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 136848 CAAATCCCAGGGCTCAACCCTGGACAGGCGATGGAAACTACCAAGCTGGAGTACGGTAGG 136907 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 136908 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 136967 Query 243 CGAAGGCA 250 |||| ||| Sbjct 136968 CGAAAGCA 136975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289233560160