Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musa_20itinerans_20[genbank_20GCA_5F001649415.1_202016-05-21] 28,415 sequences; 455,349,267 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1607 91.5 1e-16 seq293 87.8 2e-15 seq597 75.2 1e-11 >seq1607 Length=65845 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 10278 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 10219 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 10218 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 10184 >seq293 Length=321744 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 52783 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 52842 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 52843 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 52888 >seq597 Length=183504 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 130922 GGTCGTAGTGACCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 130863 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | || | ||| ||||| |||| ||||||||||||||| Sbjct 130862 AAGACCATGTGTGGGGGCTGACGTTTGCCTAGTGCCGGAAGGTTAA 130817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476668751115