Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq15 80.6 5e-13 >seq15 Length=3529114 Score = 80.6 bits (88), Expect = 5e-13 Identities = 210/312 (67%), Gaps = 14/312 (4%) Strand=Plus/Plus Query 17 GTGAAATAGACCCTGAACCCGCGC---GCCTACAAGCGGTCGGAGCCGA--GTGATTCGG 71 |||||||||| | |||| ||| || || ||||| || |||| || ||||| | Sbjct 3077783 GTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTGGGAGGAGAAAGTGAT-CTC 3077841 Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||| Sbjct 3077842 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 3077900 Query 132 CTTCAGGCCCGTT--AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | ||| ||||| || ||||||||| ||| | ||||||| || || Sbjct 3077901 AATGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 3077959 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAG--TCGCGGTAACGCGTGA 247 | ||| |||| | |||||||| ||| || |||| ||||| | | | ||| | Sbjct 3077960 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCA 3078019 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| Sbjct 3078020 --GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 3078077 Query 308 GGCCAATCAAAC 319 |||| || ||| Sbjct 3078078 TGCCACTCGAAC 3078089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972793920000