Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq15 80.6 5e-13
>seq15
Length=3529114
Score = 80.6 bits (88), Expect = 5e-13
Identities = 210/312 (67%), Gaps = 14/312 (4%)
Strand=Plus/Plus
Query 17 GTGAAATAGACCCTGAACCCGCGC---GCCTACAAGCGGTCGGAGCCGA--GTGATTCGG 71
|||||||||| | |||| ||| || || ||||| || |||| || ||||| |
Sbjct 3077783 GTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTGGGAGGAGAAAGTGAT-CTC 3077841
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||||
Sbjct 3077842 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 3077900
Query 132 CTTCAGGCCCGTT--AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
| ||| ||||| || ||||||||| ||| | ||||||| || ||
Sbjct 3077901 AATGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 3077959
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAG--TCGCGGTAACGCGTGA 247
| ||| |||| | |||||||| ||| || |||| ||||| | | | ||| |
Sbjct 3077960 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCA 3078019
Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307
|||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 3078020 --GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 3078077
Query 308 GGCCAATCAAAC 319
|||| || |||
Sbjct 3078078 TGCCACTCGAAC 3078089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972793920000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |