Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq15 273 5e-71
seq1 226 7e-57
seq203 105 2e-20
seq174 89.7 1e-15
seq34 86.0 2e-14
seq61 73.4 1e-10
>seq15
Length=3529114
Score = 273 bits (302), Expect = 5e-71
Identities = 309/418 (74%), Gaps = 26/418 (6%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||||
Sbjct 3079404 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 3079345
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3079344 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 3079285
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||||| | | || | |||
Sbjct 3079284 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 3079225
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || |||||||||||| |||||||||||| ||| |||| | ||| || |||
Sbjct 3079224 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 3079165
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| || ||||| | | |
Sbjct 3079164 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 3079105
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
| ||| ||| | ||||||||||||||||||| || ||
Sbjct 3079104 C-----GAG-----------------GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATT 3079067
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||| |||||||| ||||| |||| || ||| ||||||||||||| | ||||
Sbjct 3079066 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 3079009
>seq1
Length=7984747
Score = 226 bits (250), Expect = 7e-57
Identities = 221/283 (78%), Gaps = 5/283 (2%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||
Sbjct 2001282 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTC 2001223
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2001222 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 2001163
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCC 188
| ||||||||||||||| |||| ||||||| || ||||| | | || | |||
Sbjct 2001162 TAGTTACGGCCGCCGTTCACCGAGGCTTCGGTCGCTGGCTTCCCTGTCATCAGTTCACCA 2001103
Query 189 CATCAATTAACCTTCCGGCACCGGG-CAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247
| || |||||||||||| ||| ||||||||| ||| |||| | ||| || ||
Sbjct 2001102 ACTTCCTTGACCTTCCGGCACTGGGCCAGGCGTCAGCCCCCATACATGGTCTTACGACTT 2001043
Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290
||| ||| |||||||||| ||||||||||| ||||||||
Sbjct 2001042 TGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCCTGGT 2001000
>seq203
Length=46331
Score = 105 bits (116), Expect = 2e-20
Identities = 193/277 (70%), Gaps = 7/277 (3%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 15039 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 14980
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||
Sbjct 14979 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGG-GTTTCGCTACCTTAGGA 14921
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC--TA 184
|| | | | || ||||||| || ||||||| ||| || | | | || || ||
Sbjct 14920 CCCTCA-CGCTAAGGCCGCCATTAACCGGGGGTTCCTCTAAAACCATATTTTTGGCAATA 14862
Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243
|| |||||| |||||| ||||||| |||||| | |||| | | || |
Sbjct 14861 TAGAAATTCGTTAACCAGCCGGCATCGGGCAGAAATCACACTCAATACTTAGATTTAACA 14802
Query 244 TGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| || |||| |||||| |||||| | ||||||||||
Sbjct 14801 TCTTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 14765
>seq174
Length=53570
Score = 89.7 bits (98), Expect = 1e-15
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||| | | ||||||||| ||||| | || ||||||| | | ||| ||
Sbjct 24835 GCATCTTCACGGGCAATTCAATTTCGCTGAGAAACTCGTAGAGACAGTGAAACTATCATT 24776
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
| ||||||||||| | | ||| | |||||||||||||||||| |||||| | |
Sbjct 24775 ATATTATTCGTGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACCTGAGGACCCTCA 24716
Query 133 TTGTTACGGCCGCCGTTTA 151
| |||| |||||| |||||
Sbjct 24715 TAGTTAAGGCCGCTGTTTA 24697
>seq34
Length=2296491
Score = 86.0 bits (94), Expect = 2e-14
Identities = 55/60 (92%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 106 AGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC 165
|| ||||||||||||||||||||||||| ||||||||||||||||| | | |||||||||
Sbjct 533153 AGTAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTATCTGAGCTTCGATC 533212
>seq61
Length=1472992
Score = 73.4 bits (80), Expect = 1e-10
Identities = 48/53 (91%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 101 CGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACC 153
|||||||||||||||| |||||||||| |||| ||||| |||||||||||||
Sbjct 712798 CGACAAGGAATTTCGCCACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 712746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260792120000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |