Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq15 273 5e-71 seq1 226 7e-57 seq203 105 2e-20 seq174 89.7 1e-15 seq34 86.0 2e-14 seq61 73.4 1e-10 >seq15 Length=3529114 Score = 273 bits (302), Expect = 5e-71 Identities = 309/418 (74%), Gaps = 26/418 (6%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 3079404 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 3079345 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3079344 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 3079285 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||||| | | || | ||| Sbjct 3079284 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 3079225 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 3079224 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 3079165 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| | | | Sbjct 3079164 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 3079105 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 | ||| ||| | ||||||||||||||||||| || || Sbjct 3079104 C-----GAG-----------------GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATT 3079067 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 3079066 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 3079009 >seq1 Length=7984747 Score = 226 bits (250), Expect = 7e-57 Identities = 221/283 (78%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||| Sbjct 2001282 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTC 2001223 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2001222 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 2001163 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----GCGTTAGCTAACCC 188 | ||||||||||||||| |||| ||||||| || ||||| | | || | ||| Sbjct 2001162 TAGTTACGGCCGCCGTTCACCGAGGCTTCGGTCGCTGGCTTCCCTGTCATCAGTTCACCA 2001103 Query 189 CATCAATTAACCTTCCGGCACCGGG-CAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 | || |||||||||||| ||| ||||||||| ||| |||| | ||| || || Sbjct 2001102 ACTTCCTTGACCTTCCGGCACTGGGCCAGGCGTCAGCCCCCATACATGGTCTTACGACTT 2001043 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 ||| ||| |||||||||| ||||||||||| |||||||| Sbjct 2001042 TGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCCTGGT 2001000 >seq203 Length=46331 Score = 105 bits (116), Expect = 2e-20 Identities = 193/277 (70%), Gaps = 7/277 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||||| | |||||||| Sbjct 15039 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 14980 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||| Sbjct 14979 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGG-GTTTCGCTACCTTAGGA 14921 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC--TA 184 || | | | || ||||||| || ||||||| ||| || | | | || || || Sbjct 14920 CCCTCA-CGCTAAGGCCGCCATTAACCGGGGGTTCCTCTAAAACCATATTTTTGGCAATA 14862 Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243 || |||||| |||||| ||||||| |||||| | |||| | | || | Sbjct 14861 TAGAAATTCGTTAACCAGCCGGCATCGGGCAGAAATCACACTCAATACTTAGATTTAACA 14802 Query 244 TGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || |||| |||||| |||||| | |||||||||| Sbjct 14801 TCTTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 14765 >seq174 Length=53570 Score = 89.7 bits (98), Expect = 1e-15 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||||||| ||||| | || ||||||| | | ||| || Sbjct 24835 GCATCTTCACGGGCAATTCAATTTCGCTGAGAAACTCGTAGAGACAGTGAAACTATCATT 24776 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | ||||||||||| | | ||| | |||||||||||||||||| |||||| | | Sbjct 24775 ATATTATTCGTGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACCTGAGGACCCTCA 24716 Query 133 TTGTTACGGCCGCCGTTTA 151 | |||| |||||| ||||| Sbjct 24715 TAGTTAAGGCCGCTGTTTA 24697 >seq34 Length=2296491 Score = 86.0 bits (94), Expect = 2e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 106 AGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC 165 || ||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||| Sbjct 533153 AGTAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTATCTGAGCTTCGATC 533212 >seq61 Length=1472992 Score = 73.4 bits (80), Expect = 1e-10 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 101 CGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACC 153 |||||||||||||||| |||||||||| |||| ||||| ||||||||||||| Sbjct 712798 CGACAAGGAATTTCGCCACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACC 712746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260792120000