Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq574 205 2e-50 seq86 205 2e-50 seq449 201 2e-49 >seq574 Length=21206 Score = 205 bits (226), Expect = 2e-50 Identities = 174/211 (82%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 760 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 703 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 702 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 643 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 642 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 583 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATC 209 |||||||| ||||| | || ||||||||| Sbjct 582 GACCAACTACCTAATACTACGCAGGCTCATC 552 >seq86 Length=797191 Score = 205 bits (226), Expect = 2e-50 Identities = 148/170 (87%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || ||||||||||||||||||| || |||||||||||||||||| Sbjct 591026 CACGCGGCATTG-CTCCATCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 591084 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 || ||||||||||| |||||||| ||| | |||||| ||||||||||||| |||||| | Sbjct 591085 CCCTAGGAGTCTGGGCCGTGTCTTAGTCCTAGTGTGGCTGATCATCCTCTTGGACCAGCT 591144 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 591145 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 591194 >seq449 Length=27593 Score = 201 bits (222), Expect = 2e-49 Identities = 168/202 (83%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| |||||| Sbjct 6084 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 6027 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 |||||||||| ||||| |||||| || |||||||||||| |||||||| |||||||||| Sbjct 6026 CACTGCTGCC-CCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCG 5968 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196 ||||||| || | ||| | | |||||| |||| |||||| |||||||| ||||| | Sbjct 5967 AAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACT 5908 Query 197 ACCTAGGCTCATCTGATAGCGC 218 || ||||||||| | ||||| Sbjct 5907 ACGCAGGCTCATCAAACAGCGC 5886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071993300000