Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq15 250 9e-64
seq83 100 1e-18
seq22 91.5 5e-16
>seq15
Length=3529114
Score = 250 bits (276), Expect = 9e-64
Identities = 345/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 3078131 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 3078072
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 3078071 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 3078012
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 3078011 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 3077952
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | ||| | |
Sbjct 3077951 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCATTC-CCT 3077897
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 3077896 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 3077840
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 3077839 GATCACT---------TTCTCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 3077789
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 3077788 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 3077729
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| |||| |||||||| | |||||||||| ||| ||
Sbjct 3077728 CACCCAGGAGTATTTAGCCTTACAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 3077673
>seq83
Length=900045
Score = 100 bits (110), Expect = 1e-18
Identities = 108/141 (77%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211
||||| || |||||||||| | | || ||||||||||||||||| ||||| |||
Sbjct 663912 ATTTCACAGAAAACCAGCTATATCCGATCTTCGTTGGCCTTTCACCCCTAGCCACAAGTC 663853
Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACG--CGGTCTTACCCGCGCTT 269
|||||| | ||| | || || ||||||||||||||||| | | || || | | |||
Sbjct 663852 ATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGT-TTGAGCTCTCTT 663794
Query 270 CAACCTGCCCATGGATAGATC 290
|||||||| ||||| ||||||
Sbjct 663793 CAACCTGCTCATGGCTAGATC 663773
>seq22
Length=2792836
Score = 91.5 bits (100), Expect = 5e-16
Identities = 88/112 (79%), Gaps = 1/112 (1%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||| ||||||||||| | | | ||| || |||| ||||||
Sbjct 2739083 GCTGCGCCTCAACGCATTTCGAGGAGAACCAGC-AGCTCTGGGTTCGAGTGGCATTTCAC 2739025
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTC 248
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||
Sbjct 2739024 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTC 2738973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817588640000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |