Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq15 199 1e-48
>seq15
Length=3529114
Score = 199 bits (220), Expect = 1e-48
Identities = 306/422 (73%), Gaps = 21/422 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 3078065 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 3078009
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 3078008 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 3077953
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-------ATTCGGTTA 181
||| | ||||||| |||||||||||| ||||||| |||| | |||| |||
Sbjct 3077952 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCATTCCCTTA 3077895
Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241
| | ||||||| || |||||| | | |||| | ||| ||| |||| |||| | |
Sbjct 3077894 ACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATC 3077836
Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTC 298
| | ||||||||||||| || | |||||||| | ||||||||||| ||| |
Sbjct 3077835 ACTTTCTCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCAC 3077776
Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358
| |||||||||||| ||||||||||||||||||| ||| |||||||||| ||| ||||
Sbjct 3077775 TG-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTA 3077717
Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||||||||| | | |||||| | ||||| || || | ||||| || | |||||
Sbjct 3077716 TTTAGCCTTACAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACT 3077657
Query 419 CG 420
||
Sbjct 3077656 CG 3077655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241592240000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |