Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq574 118 9e-25
seq449 118 9e-25
seq15 100 2e-19
seq1 78.8 8e-13
>seq574
Length=21206
Score = 118 bits (130), Expect = 9e-25
Identities = 123/160 (77%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | |
Sbjct 1965 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 1907
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| ||| | |||||||| ||||||| |||| ||||||||||||||
Sbjct 1906 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 1847
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||||||||||||| || | ||||
Sbjct 1846 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 1807
>seq449
Length=27593
Score = 118 bits (130), Expect = 9e-25
Identities = 123/160 (77%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | |
Sbjct 7303 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 7245
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| ||| | |||||||| ||||||| |||| ||||||||||||||
Sbjct 7244 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 7185
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||||||||||||| || | ||||
Sbjct 7184 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCAC 7145
>seq15
Length=3529114
Score = 100 bits (110), Expect = 2e-19
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| ||| ||||||| ||||||||
Sbjct 3074864 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGA 3074805
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 3074804 GATCGCGACCCTTTGTCCCGCCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 3074745
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156
|| |||||| | |||||| | ||||||||||| ||
Sbjct 3074744 GATGACTTGGCCTCATCCTCTCCTTCCTCCGGCTT 3074710
>seq1
Length=7984747
Score = 78.8 bits (86), Expect = 8e-13
Identities = 110/155 (71%), Gaps = 6/155 (4%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||| | ||| | ||| ||| ||||||| ||||| |
Sbjct 2000456 CGAGTTGCAGCCTGCAATCTGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCCTG- 2000514
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
|| |||| ||| |||||||| ||||||| |||| ||||||||||||
Sbjct 2000515 -----CGACCCTTTGTCCCGCCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGCCAT 2000569
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156
|| |||||| | |||||| | ||||||||||| ||
Sbjct 2000570 GATGACTTGGCCTCATCCTCTCCTTCCTCCGGCTT 2000604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415997481250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |