Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq15 250 4e-64
seq81 102 1e-19
seq22 84.2 3e-14
>seq15
Length=3529114
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 3080143 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 3080084
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 3080083 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 3080024
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 3080023 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 3079964
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 3079963 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 3079904
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 3079903 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 3079871
>seq81
Length=926739
Score = 102 bits (112), Expect = 1e-19
Identities = 105/136 (77%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 54462 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 54521
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 54522 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 54581
Query 123 AAGGACAGCTCCTCTC 138
| ||| || |||||||
Sbjct 54582 AGGGAAAGGTCCTCTC 54597
>seq22
Length=2792836
Score = 84.2 bits (92), Expect = 3e-14
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139
||||||| |||||||||| |||| ||||||||||||||||||| ||| || ||||||||
Sbjct 2738313 AACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCA 2738372
Query 140 AATTTCCTACGCCCAC 155
| || ||||||||
Sbjct 2738373 ATGCTCTAACGCCCAC 2738388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780795272500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |