Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq449 118 2e-24 seq574 114 3e-23 seq86 91.5 3e-16 >seq449 Length=27593 Score = 118 bits (130), Expect = 2e-24 Identities = 160/222 (72%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 ||||| ||||||| | | | ||||| || |||||| | | ||||| || | || | Sbjct 6107 AAAGAGCTTTACAAGCGGCATTGCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTT 6048 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| |||| ||||| |||||||||| ||||| ||||| || |||||||||||| Sbjct 6047 CGCCCATTGTCCAAGATTCCCCACTGCTGCC-CCCGTGGGAGTCCGGGCCGTGTCTCAGT 5989 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||||| || | ||| ||| | ||| |||| | |||| ||| ||| ||| Sbjct 5988 CCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTA 5929 Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303 || || |||||||||| ||||| | |||| ||| || Sbjct 5928 CCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCG 5887 >seq574 Length=21206 Score = 114 bits (126), Expect = 3e-23 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 742 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 683 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 682 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 623 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 622 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 563 Query 285 GCATCCCCATC 295 ||| | |||| Sbjct 562 GCAGGCTCATC 552 >seq86 Length=797191 Score = 91.5 bits (100), Expect = 3e-16 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| ||| ||||| | | ||| |||| || ||| |||||| || ||||| || Sbjct 591015 CCTTCCACCTCCACGCGGCATTGCTCCATCAGGCTTTCGCCCATTGCGGAAAATTCCCCA 591074 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||||||| ||||||| ||| |||||||| ||| | | ||||| || | |||||| Sbjct 591075 CTGCTGCCTCCCCTAGGAGTCTGGGCCGTGTCTTAGTCCTAGTGTGGCTGATCATCCTCT 591134 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 || | ||| ||| | | || ||| || || || | || |||| ||||| Sbjct 591135 TGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 591189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068793320000