Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20]
625 sequences; 243,174,629 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq449 118 2e-24
seq574 114 3e-23
seq86 91.5 3e-16
>seq449
Length=27593
Score = 118 bits (130), Expect = 2e-24
Identities = 160/222 (72%), Gaps = 1/222 (0%)
Strand=Plus/Minus
Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141
||||| ||||||| | | | ||||| || |||||| | | ||||| || | || |
Sbjct 6107 AAAGAGCTTTACAAGCGGCATTGCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTT 6048
Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201
|| |||||| |||| ||||| |||||||||| ||||| ||||| || ||||||||||||
Sbjct 6047 CGCCCATTGTCCAAGATTCCCCACTGCTGCC-CCCGTGGGAGTCCGGGCCGTGTCTCAGT 5989
Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261
||| ||||| || | ||| ||| | ||| |||| | |||| ||| ||| |||
Sbjct 5988 CCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTA 5929
Query 262 CCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCG 303
|| || |||||||||| ||||| | |||| ||| ||
Sbjct 5928 CCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCG 5887
>seq574
Length=21206
Score = 114 bits (126), Expect = 3e-23
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 742 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 683
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 682 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 623
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| ||
Sbjct 622 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 563
Query 285 GCATCCCCATC 295
||| | ||||
Sbjct 562 GCAGGCTCATC 552
>seq86
Length=797191
Score = 91.5 bits (100), Expect = 3e-16
Identities = 125/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| ||| ||||| | | ||| |||| || ||| |||||| || ||||| ||
Sbjct 591015 CCTTCCACCTCCACGCGGCATTGCTCCATCAGGCTTTCGCCCATTGCGGAAAATTCCCCA 591074
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||||||| ||||||| ||| |||||||| ||| | | ||||| || | ||||||
Sbjct 591075 CTGCTGCCTCCCCTAGGAGTCTGGGCCGTGTCTTAGTCCTAGTGTGGCTGATCATCCTCT 591134
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
|| | ||| ||| | | || ||| || || || | || |||| |||||
Sbjct 591135 TGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 591189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068793320000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |