Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oropetium_20thomaeum_20[genbank_20GCA_5F001182835.1_202015-07-20] 625 sequences; 243,174,629 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq23 165 6e-36 >seq23 Length=2780208 Score = 165 bits (182), Expect = 6e-36 Identities = 567/875 (65%), Gaps = 17/875 (2%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| |||| | | || ||| | ||||| ||||||| ||| ||||||| Sbjct 1222528 TGTTCCCGATCAAGTACCCGCAGATCTGGGAGTTTTACAAGAAGGCGGTAGCCTCCTTCT 1222469 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGA-GCGTTTATCGAGC 61182 |||| | |||||||| || | || ||| | ||||||| || || | | Sbjct 1222468 GGACCGCCGAGGAGGTGGACCTCTCTGCCGACGCGCGCCACTGGGACGCCGCCCTCAACC 1222409 Query 61183 --GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCG 61240 | || | |||||||| || ||| |||| ||||| ||||| || ||||| |||| Sbjct 1222408 CCGACGAGCGCCATTTCATCTCCCACGTGCTGGCCTTCTTCGCCGCCTCCGACGGCATCG 1222349 Query 61241 TCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTT 61300 | ||||| | | || ||| | ||| || || || | |||||||| | Sbjct 1222348 TGCTGGAGAACCTCGCGTCCCGCTTCATGTCGGACGTCCAGGTCGCCGAGGCGCGCGCCT 1222289 Query 61301 TCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCG 61360 | ||||| |||||||| ||||| ||||| ||||||||||||||||| | || | | Sbjct 1222288 TTTACGGGTTCCAGATCGCCATCGAGAACATCCACTCGGAGATGTACTCGCTGCTGCTGG 1222229 Query 61361 ATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATAC 61420 | ||||||||| | || | ||||| || || ||||| |||||||||||| | | Sbjct 1222228 AGACGTACATCCGCGACGGCGCGGAGAAGGACCGCCTGTTCCGCGCCATCGAGACGGTTC 1222169 Query 61421 CGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA--C 61478 | || ||| || || || || |||||| | |||||| || |||| | Sbjct 1222168 CCGCCGTGCGCCGCAAGGCCGAGTGGGCCATGCGCTGGATC-----GACGGCGGCGAGCG 1222114 Query 61479 ATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTT 61538 || | || || | | || || || |||||||| | || ||| || || || Sbjct 1222113 CTTCGCGGAGCGCCTCGTCGCGTTCGCCTGCGTCGAGGGCATCTTCTTCTCGGGCTCCTT 1222054 Query 61539 TGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598 ||| ||||| ||| | ||||| || || || ||||| || || |||||| ||| || Sbjct 1222053 CTGCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGACTCACCTTCTCCAACGA 1221994 Query 61599 GTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTA 61658 | | || || |||||||||||| |||| || || || || | || | | | | | Sbjct 1221993 GCTCATCTCGCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTACTCTACGACCTC-C 1221935 Query 61659 TCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTAT 61718 || | | | | || | |||| || || | ||||| || || || || || Sbjct 1221934 TCCGCTCCA-AGCTCGAC-GAGGCCCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACAT 1221877 Query 61719 CGAACAGGAATT--TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 ||| | || || |||| ||||| | ||| | | ||| |||||||||| | | Sbjct 1221876 CGAGCGCGAGTTCGTCTG--CGACGCGCTCCCCTGCGCGCTCGTCGGCATGAACGGCGTG 1221819 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836 || ||| ||||| || || || || |||||||| ||| | | | |||| ||| Sbjct 1221818 CTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCATGGCGCTGGGACACAAG 1221759 Query 61837 CGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896 ||| || || ||||| || || | ||||| | || || ||| | |||||| Sbjct 1221758 AAGATATACAACGTCGTCAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAG 1221699 Query 61897 ACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || ||||| |||||||| || || ||||| || || Sbjct 1221698 ACCAATTTCTTCGAGAAGCGCGTCGGCGAGTACCA 1221664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564971650000