Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq11 73.4 7e-11 >seq11 Length=23014695 Score = 73.4 bits (80), Expect = 7e-11 Identities = 103/143 (72%), Gaps = 9/143 (6%) Strand=Plus/Plus Query 89 GATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATACAT 148 |||||| ||||| || ||| || |||| |||| | ||| |||||||| ||| Sbjct 9337858 GATCCGGAGATTCCCAAATAGGTCAACCT-----TTTGA---ACTGCCTGCTGAATCCAT 9337909 Query 149 AGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATC 207 | | |||| || ||| ||||||||||||||||| |||||| ||||||||||| | Sbjct 9337910 GAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGC 9337969 Query 208 AACCGAGATTCCCAAAGTAGTGG 230 | | ||||||| ||||| || Sbjct 9337970 ANAAGCGATTCCCGTAGTAGCGG 9337992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918399889792