Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20barthii_20[genbank_20GCA_5F000182155.3_202014-05-08] 12 sequences; 308,272,304 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 2e-17 >seq7 Length=24128185 Score = 95.1 bits (104), Expect = 2e-17 Identities = 95/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | || || ||| || ||| Sbjct 9736746 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCACGCTTGGTTGAAAAGCTAGT 9736689 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||| | | |||||||||||| ||||||||||||||||||||||||| || | Sbjct 9736688 GGTGCGAAGCTATCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTA 9736629 Query 121 G 121 | Sbjct 9736628 G 9736628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199904768