Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19]
2,491 sequences; 259,907,595 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq3 87.8 2e-15
seq82 73.4 4e-11
>seq3
Length=29620734
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| || | | ||| ||
Sbjct 16594710 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCGCAAAAGG 16594769
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 16594770 G-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 16594818
>seq82
Length=35524
Score = 73.4 bits (80), Expect = 4e-11
Identities = 77/100 (77%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 90 GGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCGCAG 149
|||||| | ||| |||||||||||| || |||| || | ||| ||| || |||||
Sbjct 5184 GGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTTGCAAAAGGG-GGTCGCAG 5242
Query 150 AGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
|| ||| || |||||||||||| |||||||||||| ||
Sbjct 5243 TGACCAGGCCCGGGCAACTGTTTACCAAAAACACAGGTCT 5282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531187181314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |