Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq182 242 6e-62 >seq182 Length=15015 Score = 242 bits (268), Expect = 6e-62 Identities = 207/253 (82%), Gaps = 13/253 (5%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 7916 CATTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 7974 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-------CAGCCACCAACCA 129 | || | |||| |||| |||||||||||||| | ||| | || Sbjct 7975 ATCT-CGTGCGGCTAAGAGCCGCCTGTCCCTCTAAGAAGATTTAGTACCGCCGGCTGCCT 8033 Query 130 TAGTCGATGGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAG 185 | | | ||| ||||||||||||||| |||||||||||||||| |||||| ||| Sbjct 8034 TGGAAGCCGGGTACGTCTATTTAGCAGGTTAGAGTCTCGTTCGTTATCGCAATTAAGCAG 8093 Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 8094 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAG 8153 Query 246 CTATCAATCTGTC 258 || |||||||||| Sbjct 8154 CTTTCAATCTGTC 8166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796780771971