Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq3 125 2e-26 >seq3 Length=29620734 Score = 125 bits (138), Expect = 2e-26 Identities = 92/107 (86%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 53 TTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTC 112 |||||||||||| || |||||||||||||||||||||||||||||||| || |||||| Sbjct 14914069 TTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCATGTCTC 14914128 Query 113 AGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCG 159 ||| ||| |||| |||||||||||||| || || ||| |||| ||| Sbjct 14914129 AGTCCCACTGTGGCTGATCATCCTCTCGAACTAGCTACTGATCATCG 14914175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071973296480