Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq182 116 4e-24 >seq182 Length=15015 Score = 116 bits (128), Expect = 4e-24 Identities = 137/183 (75%), Gaps = 7/183 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT----TG--CTCGAATACAT 63 || ||||||||||| ||||||||| | |||||||||| | || || ||||| | Sbjct 8664 ACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGTCAAGTGATGGCCTTGAATATTT 8605 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 | ||||||||||| ||||||||| | |||| | ||||||| ||||| |||||| | Sbjct 8604 TTGCATGGAATAATGGAATAGGACTT-CGGTCCCATTTTGTTGGTTTTAAGGACCTGAAG 8546 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||||||| || || |||||| | ||||| || | |||||||||||||| Sbjct 8545 TAATGATAAATGGAGACAGGCGGGGGCATTCGTATTGCTACGTTAGAGGTGAAATTCTTG 8486 Query 184 GAT 186 ||| Sbjct 8485 GAT 8483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511987644640