Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 9e-16 >seq6 Length=21794218 Score = 89.7 bits (98), Expect = 9e-16 Identities = 101/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| | ||||| || ||| ||||| |||||||| || || || || Sbjct 1597928 CATGGAATGCTTCTT-GAGGAATGTCAACGGACCCCACACGCTTCATACGCTTCTTCCCT 1597986 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| |||| ||| ||||| | | || || || ||||| |||||| Sbjct 1597987 TCCTTTTGCTTCTCTAGCAACTTTTTTTTACGAGTAATATCTCCACCATAGCACTTGGCC 1598046 Query 217 AGTACGTTCTTTCT 230 || || |||||||| Sbjct 1598047 AGAACATTCTTTCT 1598060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838379115456