Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20brachyantha_20[refseq_20GCF_5F000231095.1_202012-01-19] 2,491 sequences; 259,907,595 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq3 113 1e-22 >seq3 Length=29620734 Score = 113 bits (124), Expect = 1e-22 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 202 CGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCA 261 ||| |||||||||| |||||| ||||| |||||| ||| ||||||||| || ||| Sbjct 14914175 CGATGATCAGTAGCTAGTTCGAGAGGATGATCAGCCACAGTGGGACTGAGACATGGCCCA 14914116 Query 262 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAA 308 |||||||||||||||||||||||||||| || | |||||||| ||| Sbjct 14914115 GACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAA 14914069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497562694784