Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq9751 342 8e-92
seq9644 150 3e-34
>seq9751
Length=7809
Score = 342 bits (378), Expect = 8e-92
Identities = 233/258 (90%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2935 ACTCGCTGGCTCCGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2876
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
||||||||||||| |||||||||| ||| || || ||||||||||||||||||||||
Sbjct 2875 CCTGTTATTGCCTAAAACTTCCATCCGCTTGA-GCGGATAGTCCCTCTAAGAAGCCAGCG 2817
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || | || ||||||||||| |||||||||||||||||||||||| |||||
Sbjct 2816 TACTGCCAAAG-CAATACGGGCTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTA 2758
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2757 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 2698
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 2697 AAGAGCTCTCAATCTGTC 2680
>seq9644
Length=3249
Score = 150 bits (166), Expect = 3e-34
Identities = 98/108 (91%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210
||| | ||||||||||||||| || ||||||||||||||||| ||||||||||||| ||
Sbjct 3206 AGGCTGAGGTCTCGTTCGTTAACGAAATTAACCAGACAAATCGCTCCACCAACTAAAAAT 3147
Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct 3146 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTATC 3099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796602401319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |