Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq23756 241 5e-61
seq21247 241 5e-61
seq19772 241 5e-61
seq17831 241 5e-61
seq15625 241 5e-61
seq13637 241 5e-61
seq13488 241 5e-61
seq11525 241 5e-61
seq11453 241 5e-61
seq6234 241 5e-61
seq812 241 5e-61
seq24875 170 7e-40
seq12843 123 9e-26
seq14495 116 1e-23
seq22396 109 2e-21
seq21591 98.7 4e-18
seq9114 93.3 2e-16
seq8230 75.2 4e-11
>seq23756
Length=3524
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 2710 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 2651
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 2650 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 2591
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 2590 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 2531
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 2530 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 2476
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 2475 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 2419
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 2418 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 2368
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 2367 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 2308
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 2307 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 2252
>seq21247
Length=24338
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 19010 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 18951
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 18950 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 18891
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 18890 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 18831
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 18830 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 18776
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 18775 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 18719
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 18718 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 18668
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 18667 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 18608
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 18607 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 18552
>seq19772
Length=18710
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 13381 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 13322
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 13321 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 13262
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 13261 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 13202
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 13201 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 13147
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 13146 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 13090
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 13089 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 13039
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 13038 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 12979
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 12978 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 12923
>seq17831
Length=3973
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 1121 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 1062
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 1061 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 1002
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 1001 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 942
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 941 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 887
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 886 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 830
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 829 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 779
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 778 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 719
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 718 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 663
>seq15625
Length=23200
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 15474 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 15415
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 15414 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 15355
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 15354 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 15295
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 15294 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 15240
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 15239 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 15183
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 15182 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 15132
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 15131 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 15072
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 15071 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 15016
>seq13637
Length=2250
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 948 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 889
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 888 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 829
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 828 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 769
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 768 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 714
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 713 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 657
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 656 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 606
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 605 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 546
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 545 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 490
>seq13488
Length=6934
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 5320 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 5261
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 5260 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 5201
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 5200 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 5141
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 5140 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 5086
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 5085 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 5029
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 5028 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 4978
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 4977 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 4918
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 4917 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 4862
>seq11525
Length=6548
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 1219 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 1160
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 1159 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 1100
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 1099 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 1040
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 1039 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 985
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 984 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 928
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 927 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 877
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 876 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 817
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 816 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 761
>seq11453
Length=18929
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 17711 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 17770
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 17771 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 17830
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 17831 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 17890
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 17891 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 17945
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 17946 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 18002
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 18003 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 18053
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 18054 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 18113
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 18114 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 18169
>seq6234
Length=45946
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 15437 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 15496
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 15497 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 15556
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 15557 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 15616
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 15617 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 15671
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 15672 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 15728
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 15729 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 15779
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 15780 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 15839
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 15840 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 15895
>seq812
Length=1111
Score = 241 bits (266), Expect = 5e-61
Identities = 343/476 (72%), Gaps = 30/476 (6%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 1096 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 1037
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||| | ||
Sbjct 1036 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGT 977
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 976 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 917
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-------CCCACACGGGT 367
|| | |||||||| |||||||||||||||||||| | || | |
Sbjct 916 ACAAT----CGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGTTC-CCT 862
Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426
||||| || ||| | | | |||| |||||||||||||| |||||||| ||||
Sbjct 861 TAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA-GA 805
Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC---ACATGGTTTCAGGTACTA 483
| | || ||| |||| || | ||| || || ||||||| || |||
Sbjct 804 GATCACT---------TTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTA 754
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||||| ||| | ||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 753 TTTCACTACCCACTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGT 694
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 693 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 638
>seq24875
Length=9158
Score = 170 bits (188), Expect = 7e-40
Identities = 347/501 (69%), Gaps = 21/501 (4%)
Strand=Plus/Plus
Query 85 TGTGGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCAC 143
|| ||||| |||||| |||| ||||||||||||| || | ||| ||||| ||
Sbjct 1810 TGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTAC 1869
Query 144 CTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATC 203
|||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |
Sbjct 1870 TGAAATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGC 1929
Query 204 CACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CC 262
|||| ||||||||| | ||| | || || ||||||||||||||||| | | |||
Sbjct 1930 CACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAG 1989
Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT 322
| | ||||||||||| ||||| |||||| | | |||||||| || | | | |
Sbjct 1990 CTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAG-GAAGAACGT 2047
Query 323 ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAA-CCTCGCGACAC 381
| | ||| ||| || || |||| || | || |||| || | | |
Sbjct 2048 A---AATCTTCCACCTCTGGAAAGC-AC--CTACACCTAATGGCTTAAGCCGCTGTTCCC 2101
Query 382 AACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCA 441
| | ||||| | | ||| | | ||||| ||||||| | | || ||
Sbjct 2102 ATTTC---CTCGCTGACCCATCATGCGAAAGGTACGCCGTTA-GAGTGACTGCGCCCGCG 2157
Query 442 CTTCAGCTC---CGACGGATTGTAGGCACATGGTTTCAGGT--ACTATTTCACTCCCCGC 496
| || |||| |||| |||||| ||| | | |||||| ||||| |||||||||
Sbjct 2158 C-TCCGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGA 2216
Query 497 CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTAT 556
||||| |||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 2217 TTGGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATAC 2276
Query 557 TTAGGCTTAACGGGTGGTCCC 577
||||||||| ||||||||||
Sbjct 2277 TTAGGCTTAGAGGGTGGTCCC 2297
>seq12843
Length=43143
Score = 123 bits (136), Expect = 9e-26
Identities = 161/220 (73%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||| |||||||||||| | | ||| || ||| ||||||
Sbjct 39578 GCTGCGCCTCAACACATTTCGGTGAGAACCAGCTAGCTCTGGGTTCGAGCGGCATTTCAC 39519
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| | | | || ||| | ||| ||||||| |||| | ||
Sbjct 39518 CCCTAACCACAACTCATCCGTTAATTCTTGAACATCAGTCGGTTCGGACCTCTGCTTAGT 39459
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| | || |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 39458 TTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 39399
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354
|| | |||||||| ||||||||||| ||||||||
Sbjct 39398 ACAAT----CGCCCTATGAAGACTCGCTTTCACTACGGCT 39363
>seq14495
Length=663
Score = 116 bits (128), Expect = 1e-23
Identities = 161/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 85 TGTGGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCAC 143
|| ||||| |||||| |||| ||||||||||||| || | | ||||| ||
Sbjct 152 TGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGATGTCATACGCTCTAC 211
Query 144 CTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATC 203
|||| ||||| ||| ||||| |||| | | ||| ||||||||||||||||| |
Sbjct 212 TAAAATAGATTTCACGGAAAACCAACTATATCCGATCTTGGTTGGCCTTTCACCCCTAGC 271
Query 204 CACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CC 262
|||| |||||||| | ||| | || | ||||||||||||||||| | | |||
Sbjct 272 CACAAGTCATCCCTGTATTTTGCCACAAACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAG 331
Query 263 CGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305
| | ||||||||||| ||||| |||||| | | ||||||||
Sbjct 332 CTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC 374
>seq22396
Length=11719
Score = 109 bits (120), Expect = 2e-21
Identities = 83/98 (85%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGT 526
|| ||||||| || |||||||||| ||| | |||| | ||||||||||||||||||| ||
Sbjct 789 CACGGTTTCACGTTCTATTTCACTACCCACTAGGGATTCTTTTCACCTTTCCCTCACCGT 730
Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564
||| |||||||||||||| |||||||||||| |||
Sbjct 729 ACTACATCGCTATCGGTCACCCAGGAGTATTTAGCCTT 692
>seq21591
Length=13908
Score = 98.7 bits (108), Expect = 4e-18
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 491 CCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAG 550
||||| ||||| |||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 4533 CCCCGATTGGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAG 4474
Query 551 GAGTATTTAGGCTTAACGGGTGGTCCC 577
|| || ||||||||| | ||||||||
Sbjct 4473 GAATACTTAGGCTTAGAGAGTGGTCCC 4447
>seq9114
Length=5275
Score = 93.3 bits (102), Expect = 2e-16
Identities = 129/178 (72%), Gaps = 6/178 (3%)
Strand=Plus/Minus
Query 179 GTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGG 238
||| || |||| ||||||||||| ||||| |||||| || | | |||||| | ||| ||
Sbjct 298 GTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGG 239
Query 239 TTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCT 298
||||| ||| | || | | || |||||| || | |||| ||||||||| | |
Sbjct 238 TTCGGACCTTTGCTTAGTTTCATCCAAGCTTCATCCAGGTCATGTATAGATCACCCAGGT 179
Query 299 TCGGGT-CTTGATC-GTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354
|||||| | | | | ||| || | |||||||| |||||||||||||||| |||
Sbjct 178 TCGGGTCCATAAGCAGTGACAAT----CGCCCTATGAAGACTCGCTTTCGCTACAGCT 125
>seq8230
Length=39294
Score = 75.2 bits (82), Expect = 4e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGT 526
|| ||||||| || |||||||||| ||| | ||||| ||||| |||||||||||| ||
Sbjct 33848 CACGGTTTCATGTTCTATTTCACTACCCACTGGGGGTTCTTTTTACCTTTCCCTCATGGC 33907
Query 527 ACTTGTCCGCTATCGGTCACC 547
||| | |||||| ||||||
Sbjct 33908 ACTACTTTGCTATCAGTCACC 33928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817134712576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |