Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq23756 199 1e-48
seq21247 199 1e-48
seq19772 199 1e-48
seq17831 199 1e-48
seq15625 199 1e-48
seq13637 199 1e-48
seq13488 199 1e-48
seq11525 199 1e-48
seq11453 199 1e-48
seq6234 199 1e-48
seq812 199 1e-48
seq24875 111 4e-22
seq22396 109 1e-21
seq21591 87.8 4e-15
seq2030 78.8 2e-12
seq12843 77.0 8e-12
seq8230 77.0 8e-12
>seq23756
Length=3524
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 2644 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 2588
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 2587 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 2532
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 2531 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 2474
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 2473 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 2414
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 2413 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 2354
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 2353 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 2295
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 2294 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 2235
Query 420 G 420
|
Sbjct 2234 G 2234
>seq21247
Length=24338
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 18944 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 18888
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 18887 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 18832
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 18831 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 18774
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 18773 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 18714
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 18713 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 18654
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 18653 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 18595
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 18594 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 18535
Query 420 G 420
|
Sbjct 18534 G 18534
>seq19772
Length=18710
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 13315 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 13259
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 13258 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 13203
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 13202 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 13145
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 13144 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 13085
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 13084 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 13025
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 13024 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 12966
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 12965 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 12906
Query 420 G 420
|
Sbjct 12905 G 12905
>seq17831
Length=3973
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 1055 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 999
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 998 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 943
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 942 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 885
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 884 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 825
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 824 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 765
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 764 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 706
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 705 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 646
Query 420 G 420
|
Sbjct 645 G 645
>seq15625
Length=23200
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 15408 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 15352
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 15351 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 15296
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 15295 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 15238
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 15237 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 15178
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 15177 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 15118
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 15117 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 15059
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 15058 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 14999
Query 420 G 420
|
Sbjct 14998 G 14998
>seq13637
Length=2250
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 882 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 826
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 825 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 770
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 769 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 712
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 711 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 652
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 651 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 592
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 591 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 533
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 532 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 473
Query 420 G 420
|
Sbjct 472 G 472
>seq13488
Length=6934
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 5254 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 5198
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 5197 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 5142
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 5141 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 5084
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 5083 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 5024
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 5023 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 4964
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 4963 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 4905
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 4904 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 4845
Query 420 G 420
|
Sbjct 4844 G 4844
>seq11525
Length=6548
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 1153 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 1097
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 1096 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 1041
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 1040 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 983
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 982 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 923
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 922 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 863
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 862 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 804
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 803 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 744
Query 420 G 420
|
Sbjct 743 G 743
>seq11453
Length=18929
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 17777 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 17833
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 17834 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 17889
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 17890 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 17947
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 17948 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 18007
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 18008 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 18067
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 18068 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 18126
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 18127 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 18186
Query 420 G 420
|
Sbjct 18187 G 18187
>seq6234
Length=45946
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 15503 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 15559
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 15560 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 15615
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 15616 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 15673
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 15674 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 15733
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 15734 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 15793
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 15794 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 15852
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 15853 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 15912
Query 420 G 420
|
Sbjct 15913 G 15913
>seq812
Length=1111
Score = 199 bits (220), Expect = 1e-48
Identities = 306/421 (73%), Gaps = 19/421 (5%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||| ||||| |
Sbjct 1030 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 974
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 973 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 918
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| ||||||| |||| | ||| ||| |
Sbjct 917 GACAAT-CGCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCGTTCCCTTA 860
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| ||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 859 ACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 800
Query 243 AAGTGGGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCT 299
| ||||||||||||| || | |||||||| | ||||||||||| ||| ||
Sbjct 799 CTTTCCCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACT 740
Query 300 CCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTAT 359
|||||||||||| ||||||||||||||||||| ||| |||||||||| ||| |||||
Sbjct 739 G-GGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTAT 681
Query 360 TTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| | | |||||| | ||||| || || | ||||| || | ||||||
Sbjct 680 TTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTC 621
Query 420 G 420
|
Sbjct 620 G 620
>seq24875
Length=9158
Score = 111 bits (122), Expect = 4e-22
Identities = 104/130 (80%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312
|||| |||| ||||| | | ||||| ||| ||| |||||||| | |||||||||||
Sbjct 2171 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCCGATT-GGGGTTCTTTT 2229
Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372
| |||||||||||||||||| || | |||||||||| | || | || |||| ||| ||||
Sbjct 2230 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 2289
Query 373 ATGGTCCCCC 382
|||||||||
Sbjct 2290 GTGGTCCCCC 2299
>seq22396
Length=11719
Score = 109 bits (120), Expect = 1e-21
Identities = 89/107 (83%), Gaps = 1/107 (1%)
Strand=Plus/Minus
Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329
||||||||| | ||||||||||| ||| || ||| |||||||| |||||||||||| ||
Sbjct 788 ACGGTTTCACGTTCTATTTCACTACCCACTA-GGGATTCTTTTCACCTTTCCCTCACCGT 730
Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGG 376
|||| || |||||||||| ||| |||||||||||||| | | |||
Sbjct 729 ACTACATCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGG 683
>seq21591
Length=13908
Score = 87.8 bits (96), Expect = 4e-15
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361
|||||||||||| |||||||||||||||||| || | |||||||||| | || | || ||
Sbjct 4525 GGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTT 4466
Query 362 AGCCTTGGAGGATGGTCCCCC 382
|| ||| ||| |||||||||
Sbjct 4465 AGGCTTAGAGAGTGGTCCCCC 4445
>seq2030
Length=12184
Score = 78.8 bits (86), Expect = 2e-12
Identities = 105/144 (73%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTG 247
||||||| || |||||| | | |||| | ||| ||| |||| |||| | || |
Sbjct 7454 GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACTTTC 7513
Query 248 GGCTCCCACTGCTTGTACGCATA---CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
|||| |||||||| || | |||||||| | ||||||||||| ||| || |||
Sbjct 7514 CCCTCCTACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTACCCACTG-GGG 7572
Query 305 GTTCTTTTCGCCTTTCCCTCACGG 328
||||||||| ||||||||||| ||
Sbjct 7573 GTTCTTTTCACCTTTCCCTCATGG 7596
>seq12843
Length=43143
Score = 77.0 bits (84), Expect = 8e-12
Identities = 182/262 (69%), Gaps = 15/262 (6%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||| ||| || || ||| ||||||||||| |||| ||||| |
Sbjct 39512 CCACAACTCAT-CCGTTAA-TTCTTGAACATCAGTCGGTTCGGACCTCTGCTTAGTT-TC 39456
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
| |||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 39455 ATCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 39400
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTA----A 182
||| | ||||||| |||||||||||| | ||||| |||| | ||| ||| |
Sbjct 39399 GACAAT-CGCCCTATGAAGACTCGCTTT-CACTACGGCTCCGGTGGGTTCCGTTCCCTTA 39342
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242
| | ||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 39341 ACCAAGACACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCA 39282
Query 243 AAGTGGGCTCCCACTGCTTGTA 264
| |||||||||||||||
Sbjct 39281 CTTTCCCCTCCCACTGCTTGTA 39260
>seq8230
Length=39294
Score = 77.0 bits (84), Expect = 8e-12
Identities = 65/79 (82%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329
||||||||| | ||||||||||| ||| || ||||||||||| ||||||||||| ||
Sbjct 33849 ACGGTTTCATGTTCTATTTCACTACCCACTG-GGGGTTCTTTTTACCTTTCCCTCATGGC 33907
Query 330 ACTAGTTCACTATCGGTCA 348
|||| || ||||| ||||
Sbjct 33908 ACTACTTTGCTATCAGTCA 33926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241282162816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |