Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq23755 250 4e-64
seq21247 250 4e-64
seq19772 250 4e-64
seq17831 250 4e-64
seq15625 250 4e-64
seq11721 250 4e-64
seq11525 250 4e-64
seq11453 250 4e-64
seq6234 250 4e-64
seq811 250 4e-64
seq13521 244 2e-62
seq5989 241 2e-61
seq3587 237 2e-60
seq24022 181 2e-43
seq14496 181 2e-43
seq3844 116 6e-24
seq13898 102 1e-19
seq17049 82.4 1e-13
seq19175 78.8 1e-12
>seq23755
Length=917
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 555 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 496
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 495 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 436
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 435 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 376
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 375 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 316
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 315 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 283
>seq21247
Length=24338
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 21022 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 20963
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 20962 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 20903
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 20902 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 20843
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 20842 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 20783
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 20782 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 20750
>seq19772
Length=18710
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 15393 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 15334
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 15333 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 15274
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 15273 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 15214
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 15213 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 15154
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 15153 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 15121
>seq17831
Length=3973
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 3133 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 3074
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 3073 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 3014
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 3013 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 2954
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 2953 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 2894
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 2893 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 2861
>seq15625
Length=23200
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 17486 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 17427
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 17426 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 17367
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 17366 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 17307
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 17306 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 17247
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 17246 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 17214
>seq11721
Length=3621
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 304 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 245
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 244 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 185
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 184 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 125
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 124 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 65
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 64 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 32
>seq11525
Length=6548
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 3231 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 3172
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 3171 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 3112
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 3111 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 3052
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 3051 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 2992
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 2991 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 2959
>seq11453
Length=18929
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 15699 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 15758
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 15759 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 15818
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 15819 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 15878
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 15879 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 15938
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 15939 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 15971
>seq6234
Length=45946
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 13426 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 13485
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 13486 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 13545
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 13546 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 13605
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 13606 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 13665
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 13666 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 13698
>seq811
Length=550
Score = 250 bits (276), Expect = 4e-64
Identities = 220/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 462 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 403
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 402 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 343
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 342 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 283
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 282 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 223
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 222 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 190
>seq13521
Length=62427
Score = 244 bits (270), Expect = 2e-62
Identities = 211/260 (81%), Gaps = 1/260 (0%)
Strand=Plus/Plus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75
|||| |||| |||||| |||||| ||| |||| ||| |||||| | | | | ||||
Sbjct 57175 CTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCGTTTACCGTAGGCA 57234
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
| ||||||| |||||||||| |||| ||||||||||||||||||| ||| || ||||
Sbjct 57235 CGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 57294
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
||||| || |||||||| |||||| ||||||||||||||| |||||||||||||||
Sbjct 57295 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 57354
Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255
||||| ||| || | ||||||||||||||||||||||||||| ||| || || | ||||
Sbjct 57355 AGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCACCTACAACTCCAG 57414
Query 256 GATGAGACGAGCCGACATCG 275
| | || ||||||||||||
Sbjct 57415 GTGGCGAAGAGCCGACATCG 57434
>seq5989
Length=102438
Score = 241 bits (266), Expect = 2e-61
Identities = 218/273 (80%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| |||||||
Sbjct 5797 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCT 5738
Query 64 ATG-CACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | |||| | ||||||| ||| |||||| |||| ||||||||||||||||||
Sbjct 5737 TTTACTGTAGGCACGATAACTGGTACACTAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 5678
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| ||
Sbjct 5677 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 5618
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||| ||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 5617 ACGTTCTGAACCTAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 5558
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | || ||||||||||||
Sbjct 5557 CCTACAGCTCCAGGTGGCGAAGAGCCGACATCG 5525
>seq3587
Length=1139
Score = 237 bits (262), Expect = 2e-60
Identities = 217/273 (79%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| |||| |||| |||||| |||||| ||| |||| ||| ||||||
Sbjct 942 GGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCG 883
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| ||| ||||||||||||||||||
Sbjct 882 TTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCATCCTTCCCGGTCCTCTCGTACT 823
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || |||||| || || |||||||| |||||| ||||||||||||||| ||
Sbjct 822 AGGGAAAGGTCCTCTTAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 763
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
|||||||||||||||||| ||| || | ||||||||||||||||||||||||||| |||
Sbjct 762 ACGTTCTGAACCCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCA 703
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| |||| ||||| | | ||||||||||||
Sbjct 702 CCTACAGCTCCAGGTGGCAAAGAGCCGACATCG 670
>seq24022
Length=6905
Score = 181 bits (200), Expect = 2e-43
Identities = 195/259 (75%), Gaps = 12/259 (5%)
Strand=Plus/Plus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76
|||| |||| |||||| |||||| ||| |||| ||| ||||| | | | | ||||
Sbjct 1209 CTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGTT-TACCGTAGGCAC 1267
Query 77 TACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTC 136
| ||||||| | |||| ||||||||||||| ||||| ||| || |||||
Sbjct 1268 GATAACTGGTAC-----------GTCCTTCCCGGTCCTCTCATACTAGGGAAAGGTCCTC 1316
Query 137 TCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCA 196
|||| || |||||||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct 1317 TCAATACTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCA 1376
Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256
|||| ||| || | ||| ||| ||||||||||| || |||| ||| || ||| | |||
Sbjct 1377 GCTCACGTACCGCATTAGTGGACGAACAGCCCAGCCATTGGAACCACCTATAGCTCTAGG 1436
Query 257 ATGAGACGAGCCGACATCG 275
| || ||||||||||||
Sbjct 1437 TGGCGAAGAGCCGACATCG 1455
>seq14496
Length=4682
Score = 181 bits (200), Expect = 2e-43
Identities = 191/251 (76%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88
|||| || | || | | |||||| || || || ||| |||||| ||||| ||| |
Sbjct 2491 CAGCAGTTCTTCCATACCAACTTATCTGGCCGGCGCTGCTATTGGCATAACAACCGGTAC 2550
Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147
|||| ||||| ||| ||| |||||||||||||| || ||||||| || | |||
Sbjct 2551 ACCATAGGTTGACCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 2610
Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204
|| || ||| |||||| ||||||||||||| ||||||||| |||||| ||| |||
Sbjct 2611 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 2670
Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264
|| |||| || |||||||| || |||||||||||||| ||||| ||||| |||| || |
Sbjct 2671 ACCACTTTCATTGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAAGATGTGATG 2730
Query 265 AGCCGACATCG 275
|| ||||||||
Sbjct 2731 AGTCGACATCG 2741
>seq3844
Length=30858
Score = 116 bits (128), Expect = 6e-24
Identities = 134/180 (74%), Gaps = 4/180 (2%)
Strand=Plus/Plus
Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88
|||| || | || | | ||||||||| ||| || ||| |||||| ||||| ||| |
Sbjct 23066 CAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 23125
Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCC-- 146
|||| ||||| ||| ||| |||||||||||||| || ||||||| || | |||
Sbjct 23126 ACCATAGGTTGACCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 23185
Query 147 --TACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204
|| || ||| |||||| ||||||||||||| ||||||||| |||||| ||| |||
Sbjct 23186 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 23245
>seq13898
Length=47190
Score = 102 bits (112), Expect = 1e-19
Identities = 80/96 (83%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 180 GCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGA 239
|| ||||||| |||||| ||| || || |||| || |||||||| || |||||||||||
Sbjct 2282 GCAACGTTCTAAACCCAACTCATGTACCACTTTCATCGGCGAACAACCGAACCCTTGGGA 2341
Query 240 CCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||| ||||| |||||||||| || ||| ||||||||
Sbjct 2342 CCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 2377
>seq17049
Length=25839
Score = 82.4 bits (90), Expect = 1e-13
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75
|||| |||| |||||| |||||| ||||| |||| | | |||||| | | | | ||||
Sbjct 22789 CTTATATGCTTTCAGCAGTTATCCTTTCCATACTTGGTTACCCAGCGTTTACCGTAGGCA 22730
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACA 129
| || |||| ||||| | || |||| |||||||||||||||||| ||||||
Sbjct 22729 CGATAATTGGTACACCAAAAGTGCGTCCTTCCCGGTCCTCTCGTACT-AGGACA 22677
>seq19175
Length=41444
Score = 78.8 bits (86), Expect = 1e-12
Identities = 81/106 (76%), Gaps = 4/106 (4%)
Strand=Plus/Minus
Query 106 CCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGA 161
||| |||||||||||||| || ||||||| || | ||| || || ||| ||
Sbjct 10943 CCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGA 10884
Query 162 TAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCC 207
|||| ||||||||||||| ||||||||| |||||| ||| ||| ||
Sbjct 10883 TAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACC 10838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780606369164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |