Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22] 25,599 sequences; 303,294,962 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq9751 416 5e-114 >seq9751 Length=7809 Score = 416 bits (460), Expect = 5e-114 Identities = 278/309 (90%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||||| | |||||||| | ||| |||||||||| Sbjct 2771 GAACGAGACCTTAACCTACTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 2830 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 2831 AGGGACTATCCGCTCAAGCGGATGGAAGTTTTAGGCAATAACAGGTCTGTGATGCCCTTA 2890 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||| ||||||||| |||||| ||||||| | ||||||| | Sbjct 2891 GATGTTCTGGGCCGCACGCGCGTTACACTGACGGAGCCAGCGAGTTC--CTCCTTGGCAG 2948 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 | | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2949 AGATGCCTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3008 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 3009 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 3068 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 3069 CCCTTTGTA 3077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946957526272