Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq24875 187 8e-45
seq21247 183 1e-43
seq19772 183 1e-43
seq17831 183 1e-43
seq15625 183 1e-43
seq11525 183 1e-43
seq11453 183 1e-43
seq6234 181 4e-43
seq14496 176 2e-41
seq13488 168 2e-39
seq5989 150 6e-34
seq13637 141 3e-31
seq3587 140 1e-30
seq10059 134 5e-29
seq6760 125 2e-26
seq23755 87.8 6e-15
seq12419 80.6 9e-13
>seq24875
Length=9158
Score = 187 bits (206), Expect = 8e-45
Identities = 235/325 (72%), Gaps = 17/325 (5%)
Strand=Plus/Plus
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299
||||||||||||||||||| | | || || | | |||||||||| ||||| |
Sbjct 75 CTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAGGTGCA 134
Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359
||||||||| |||| |||| | | ||||||| || | | |||||||||||
Sbjct 135 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 194
Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419
|| | || |||||||| ||| ||||||||| |||||||||||||||| ||||| |
Sbjct 195 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 254
Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||
Sbjct 255 GACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTC 314
Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539
||| || | ||||| | |||| ||||||||||||||
Sbjct 315 CATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAGCACCG 358
Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564
|||||| ||||| | ||||| |||
Sbjct 359 GGCAGGTGTCAGACTCTATACATCG 383
>seq21247
Length=24338
Score = 183 bits (202), Expect = 1e-43
Identities = 394/572 (69%), Gaps = 28/572 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 20615 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 20557
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 20556 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 20498
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 20497 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 20440
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 20439 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 20382
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 20381 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 20325
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| |||| | || | | ||||||| || | |
Sbjct 20324 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 20265
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 20264 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 20206
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 20205 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 20146
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 20145 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 20092
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 20091 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 20060
>seq19772
Length=18710
Score = 183 bits (202), Expect = 1e-43
Identities = 394/572 (69%), Gaps = 28/572 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 14986 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 14928
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 14927 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 14869
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 14868 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 14811
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 14810 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 14753
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 14752 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 14696
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| |||| | || | | ||||||| || | |
Sbjct 14695 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 14636
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 14635 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 14577
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 14576 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 14517
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 14516 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 14463
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 14462 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 14431
>seq17831
Length=3973
Score = 183 bits (202), Expect = 1e-43
Identities = 394/572 (69%), Gaps = 28/572 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 2726 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 2668
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 2667 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 2609
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 2608 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 2551
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 2550 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 2493
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 2492 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 2436
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| |||| | || | | ||||||| || | |
Sbjct 2435 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 2376
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 2375 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 2317
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2316 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 2257
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 2256 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 2203
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 2202 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 2171
>seq15625
Length=23200
Score = 183 bits (202), Expect = 1e-43
Identities = 394/572 (69%), Gaps = 28/572 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 17079 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 17021
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 17020 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 16962
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 16961 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 16904
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 16903 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 16846
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 16845 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 16789
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| |||| | || | | ||||||| || | |
Sbjct 16788 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 16729
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 16728 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 16670
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 16669 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 16610
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 16609 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 16556
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 16555 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 16524
>seq11525
Length=6548
Score = 183 bits (202), Expect = 1e-43
Identities = 394/572 (69%), Gaps = 28/572 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 2824 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 2766
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 2765 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 2707
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 2706 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 2649
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 2648 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 2591
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 2590 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 2534
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| |||| | || | | ||||||| || | |
Sbjct 2533 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 2474
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 2473 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 2415
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2414 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 2355
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 2354 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 2301
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 2300 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 2269
>seq11453
Length=18929
Score = 183 bits (202), Expect = 1e-43
Identities = 394/572 (69%), Gaps = 28/572 (5%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 16106 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 16164
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 16165 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 16223
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 16224 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 16281
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 16282 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 16339
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 16340 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 16396
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| |||| | || | | ||||||| || | |
Sbjct 16397 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 16456
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 16457 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 16515
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 16516 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 16575
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 16576 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 16629
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 16630 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 16661
>seq6234
Length=45946
Score = 181 bits (200), Expect = 4e-43
Identities = 391/569 (69%), Gaps = 23/569 (4%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 13833 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 13891
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 13892 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 13950
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 13951 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 14008
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235
|| | | ||||||||||| ||| | | ||| || | | || | | ||
Sbjct 14009 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCGGAAGGGGGC-CTTC 14067
Query 236 ATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTGA 293
| | || ||||||| || | || || || | || |||||| ||| | | ||| |
Sbjct 14068 TTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTAA 14125
Query 294 AGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAAT 352
|| | | |||||||| |||| | || | | ||||||| || | | ||
Sbjct 14126 AGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTAT 14185
Query 353 TTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGA 411
||||||| | || | ||||||| | || |||||||||| ||||||| |||||||
Sbjct 14186 TTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGA 14244
Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471
||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 14245 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACC 14304
Query 472 GGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTC 531
|||||||| | || || | || || | | |||| | ||| ||||||
Sbjct 14305 GGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACCTTC 14358
Query 532 CAGCACCGGGCAGGCGTCAGTCCGTATAC 560
| |||| ||||||||||||| || ||||
Sbjct 14359 CGGCACTGGGCAGGCGTCAGCCCCCATAC 14387
>seq14496
Length=4682
Score = 176 bits (194), Expect = 2e-41
Identities = 186/244 (76%), Gaps = 1/244 (0%)
Strand=Plus/Plus
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299
||||||||||||||||||| | | || || | | |||||||||| ||||| |
Sbjct 3101 CTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAGGTGCA 3160
Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359
||||||||| |||| |||| | | ||||||| || | | |||||||||||
Sbjct 3161 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 3220
Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419
|| | || |||||||| ||| ||||||||| ||||||||||||| || ||||| |
Sbjct 3221 GGTCCATGTCGGAGACAGCGGGGTAGTCGTTACACCATTCGTGCAGGCCGCTACTTATGC 3280
Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||
Sbjct 3281 GACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCTGCCGTTTACCGGGGCTTC 3340
Query 480 AATT 483
|||
Sbjct 3341 CATT 3344
>seq13488
Length=6934
Score = 168 bits (186), Expect = 2e-39
Identities = 390/572 (68%), Gaps = 27/572 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 6925 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 6867
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| ||||||||| | ||||||| ||| |||||||
Sbjct 6866 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTACCTTTTTGGGGAGGCCTACGCCCCA 6807
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 6806 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 6749
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 6748 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 6691
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 6690 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 6634
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| |||| | || | | ||||||| || | |
Sbjct 6633 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 6574
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 6573 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 6515
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 6514 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 6455
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 6454 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 6401
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 6400 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 6369
>seq5989
Length=102438
Score = 150 bits (166), Expect = 6e-34
Identities = 387/572 (68%), Gaps = 28/572 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || |||| | ||| || |
Sbjct 5390 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTAGAGGACCA-ATGTC 5332
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| ||||||||||| |||||||||| | || ||||||
Sbjct 5331 CGTCTGGCCCGAGGAAACCTTTGCATGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 5273
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| || | || || |||||||||| ||
Sbjct 5272 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 5215
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 5214 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 5157
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || ||||| ||| | | ||
Sbjct 5156 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAACCCCAGGGAACAG 5100
Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | |||||||| ||| | | | | ||||||| || | |
Sbjct 5099 TAAAGCTTCATAGGGTCTTTCTGTCTAGGTGTAGGTATTCCGCATCTTCACAGACATGTC 5040
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||| ||| ||||
Sbjct 5039 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCATGCGGGTC 4981
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468
|||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 4980 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCACCGTTC 4921
Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528
|| |||||||| | || || | || || | | |||| | ||| |||
Sbjct 4920 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 4867
Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
|||| |||| ||||||||||||| || ||||
Sbjct 4866 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 4835
>seq13637
Length=2250
Score = 141 bits (156), Expect = 3e-31
Identities = 136/175 (78%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2166 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 2107
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505
||||||||||| |||||||| || |||||||| | || || | || ||
Sbjct 2106 CGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCA 2053
Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560
| | |||| | ||| ||||||| |||| ||||||||||||| || ||||
Sbjct 2052 TCAGTTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 1998
>seq3587
Length=1139
Score = 140 bits (154), Expect = 1e-30
Identities = 316/456 (69%), Gaps = 22/456 (5%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 535 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 477
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | || ||||||
Sbjct 476 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 418
Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAA-CCCA--GATCATGGGCCAAGGTTAGATAT 176
||||| | ||| | |||||||| |||| | || || |||||||||| ||
Sbjct 417 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCACGGGTC-TGACACAAGGTTAGA-AT 360
Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232
|| | | ||||||||||| ||| | | ||| | | || || | ||||
Sbjct 359 CCGAGCTCTTACAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 302
Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290
|| | | || ||||||| || | || || || | || |||||| ||| | | ||
Sbjct 301 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 245
Query 291 TGAAGGTCCCGG-GGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349
| ||| | | ||||||| |||| | || | | ||||||| || | |
Sbjct 244 TAAAGCTTCATATGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 185
Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408
||||||||| | || | ||||||| | || |||||||||| ||||||| ||||
Sbjct 184 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 126
Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444
||||||||||||||||||||||||||||||||||||
Sbjct 125 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 90
>seq10059
Length=53196
Score = 134 bits (148), Expect = 5e-29
Identities = 86/94 (91%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 30812 TCGTTACGCCTTTCGTGCAGGTCGGAACTTACTCGACAAGGAATTTCGCTACCTTAGGAC 30753
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||| |||||||| || ||||||||
Sbjct 30752 CGTTATAGTTACGGCCGCCGTTCACCGGGGCTTC 30719
>seq6760
Length=11880
Score = 125 bits (138), Expect = 2e-26
Identities = 84/94 (89%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445
||||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 7752 TCGTTACACCTTTCTTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 7693
Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479
||||||||||| |||||||| || ||||||||
Sbjct 7692 CGTTATAGTTACGGCCGCCGTTCACCGGGGCTTC 7659
>seq23755
Length=917
Score = 87.8 bits (96), Expect = 6e-15
Identities = 110/147 (75%), Gaps = 3/147 (2%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59
||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || |
Sbjct 148 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 90
Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119
| | | | |||| |||||||| |||||||||||| |||||||||| | | |||||||
Sbjct 89 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCA 31
Query 120 GTTAAACTACCCACCAGGCACTGTCCC 146
||||| | ||| | ||||||||
Sbjct 30 TAGAAACTGTCTACCTGAGACTGTCCC 4
>seq12419
Length=33337
Score = 80.6 bits (88), Expect = 9e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444
||||||| || || ||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 3760 TCGTTACACCTTTTGTGTGGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 3702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1701964202624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |