Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glaberrima_20[genbank_20GCA_5F000147395.2_202010-09-22]
25,599 sequences; 303,294,962 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq23757 136 8e-30
seq21247 136 8e-30
seq19772 136 8e-30
seq17860 136 8e-30
seq15625 136 8e-30
seq14608 136 8e-30
seq13488 136 8e-30
seq11935 136 8e-30
seq11529 136 8e-30
seq11456 136 8e-30
seq6234 136 8e-30
seq4564 136 8e-30
seq5989 132 1e-28
seq19684 131 4e-28
seq23612 120 6e-25
seq17901 120 6e-25
seq7811 120 6e-25
seq5731 96.9 7e-18
seq19239 95.1 3e-17
seq22456 91.5 3e-16
>seq23757
Length=748
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 402 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 354
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 353 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 301
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 300 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 241
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 240 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 181
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 180 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 142
>seq21247
Length=24338
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 14713 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 14665
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 14664 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 14612
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 14611 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 14552
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 14551 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 14492
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 14491 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 14453
>seq19772
Length=18710
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 9083 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 9035
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 9034 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 8982
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 8981 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 8922
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 8921 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 8862
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 8861 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 8823
>seq17860
Length=2587
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 1018 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 970
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 969 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 917
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 916 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 857
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 856 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 797
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 796 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 758
>seq15625
Length=23200
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 11177 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 11129
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 11128 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 11076
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 11075 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 11016
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 11015 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 10956
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 10955 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 10917
>seq14608
Length=2295
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 1446 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 1494
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 1495 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 1547
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 1548 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 1607
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 1608 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1667
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 1668 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 1706
>seq13488
Length=6934
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 1023 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 975
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 974 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 922
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 921 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 862
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 861 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 802
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 801 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 763
>seq11935
Length=9697
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 9256 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 9208
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 9207 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 9155
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 9154 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 9095
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 9094 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 9035
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 9034 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 8996
>seq11529
Length=16415
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 441 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 489
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 490 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 542
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 543 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 602
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 603 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 662
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 663 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 701
>seq11456
Length=22823
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 442 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 490
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 491 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 543
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 544 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 603
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 604 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 663
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 664 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 702
>seq6234
Length=45946
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 19735 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 19783
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 19784 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 19836
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 19837 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 19896
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 19897 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 19956
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 19957 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 19995
>seq4564
Length=32340
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 22721 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 22769
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 22770 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 22822
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 22823 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 22882
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 22883 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 22942
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 22943 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 22981
>seq5989
Length=102438
Score = 132 bits (146), Expect = 1e-28
Identities = 196/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 1899 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 1947
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| ||| ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 1948 G------TTTCTTCTCCGAGAAAAGAAGTTGACGACCCGTGGG-CCTTCCACCTCCACGC 2000
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || || |||||| || ||||| || |||||||||||||||
Sbjct 2001 GGCATTGCTCCGTCAGGCTTTCTCCCATTGCAGAAAATTCCCCATTGCTGCCTCCCGTAG 2060
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||||||||| || | ||||||| || | ||| ||
Sbjct 2061 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 2120
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 2121 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 2159
>seq19684
Length=2096
Score = 131 bits (144), Expect = 4e-28
Identities = 197/280 (70%), Gaps = 19/280 (7%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 977 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 929
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTT-ACAATCCGTAGAACCTTCATCCTTCACG 119
| ||| ||| | | |||||||||| || | |||| | ||||| ||| ||||
Sbjct 928 G------TTTCTTCTCCGAGAAAAGAAGTTCGACGACCCGTGGG-CCTTCCACCTCCACG 876
Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA 179
| | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||
Sbjct 875 CGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTA 816
Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCA 239
||||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| |
Sbjct 815 GGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGA 756
Query 240 TCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
|| | | || ||| || || || | || |||| |||||
Sbjct 755 TCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 716
>seq23612
Length=8524
Score = 120 bits (132), Expect = 6e-25
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 3983 CCTTCTTCACTCACGCAATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 3924
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 3923 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 3864
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| |||||| || |||||||||| ||
Sbjct 3863 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCCGACCAACTACCTAATACTAC 3804
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 3803 GCAGGCTCATCAAACAGCG 3785
>seq17901
Length=46348
Score = 120 bits (132), Expect = 6e-25
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 4257 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 4316
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 4317 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 4376
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| |||||| || |||||||||| ||
Sbjct 4377 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCCGACCAACTACCTAATACTAC 4436
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 4437 GCAGGCTCATCAAACAGCG 4455
>seq7811
Length=8338
Score = 120 bits (132), Expect = 6e-25
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 6704 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 6763
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| ||| ||||||||||| ||| ||||| || | |||
Sbjct 6764 CTGCTGCCCCCCGTGGGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 6823
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| |||||| || |||||||||| ||
Sbjct 6824 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCCGACCAACTACCTAATACTAC 6883
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 6884 GCAGGCTCATCAAACAGCG 6902
>seq5731
Length=3795
Score = 96.9 bits (106), Expect = 7e-18
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171
||| ||||| | | ||| |||| || ||| |||||| || ||||| |||||||||
Sbjct 3130 CCTCCACGCGGCATTGCTCCATCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGC 3189
Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231
||| ||||||||| ||| |||||||||||| ||| |||| || | ||||||| || |
Sbjct 3190 CTCTCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGACTGATCATCCTCTCGGACCA 3249
Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCA 287
||| ||| | | || ||| || || || | || |||| ||||| |||||
Sbjct 3250 GCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCA 3305
>seq19239
Length=10080
Score = 95.1 bits (104), Expect = 3e-17
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| |||| ||||| |||||||||| ||||| ||||| || |||||||||||
Sbjct 9311 TCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAG 9252
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||| ||| | ||| |||| | |||| ||| ||| ||
Sbjct 9251 TCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTT 9192
Query 261 ACCCCGCCTACTACC 275
|||| || ||||||
Sbjct 9191 ACCCGACCAACTACC 9177
>seq22456
Length=22404
Score = 91.5 bits (100), Expect = 3e-16
Identities = 97/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 154 AATATTCCTC-ACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGG 212
|||||||| | ||||||||||||||||||||| ||| |||||||||||| ||| |||||
Sbjct 2204 AATATTCCCCCACTGCTGCCTCCCGTAGGAGTATGGGCCGTGTCTCAGTCCCAGTGTGGC 2145
Query 213 GGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACT 272
|| | ||||||| || | ||| ||| | | || ||| || || || | || |||
Sbjct 2144 TGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACT 2085
Query 273 ACCTAAT 279
| |||||
Sbjct 2084 AGCTAAT 2078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068526397888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |