Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26]
12 sequences; 372,860,283 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq5 75.2 8e-12
>seq5
Length=38039368
Score = 75.2 bits (82), Expect = 8e-12
Identities = 90/121 (74%), Gaps = 6/121 (5%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCAC---CGGATCACTATGAC 57
|| |||||||||||||||||| |||||||||| || | ||| |||||||||| | |
Sbjct 804358 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTC---GGCACTGTCGGATCACTAAGGC 804302
Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117
| ||||| ||||||| | || ||| ||| |||||| | ||| | || ||||||
Sbjct 804301 CGACTTTCATCTCTGCTCGACAGGTGAGTCTTGCAGTCAAGCTCCCTTCTACCTTTGCAC 804242
Query 118 T 118
|
Sbjct 804241 T 804241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351999960400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |