Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26] 12 sequences; 372,860,283 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq5 75.2 8e-12 >seq5 Length=38039368 Score = 75.2 bits (82), Expect = 8e-12 Identities = 90/121 (74%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCAC---CGGATCACTATGAC 57 || |||||||||||||||||| |||||||||| || | ||| |||||||||| | | Sbjct 804358 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTC---GGCACTGTCGGATCACTAAGGC 804302 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | ||||| ||||||| | || ||| ||| |||||| | ||| | || |||||| Sbjct 804301 CGACTTTCATCTCTGCTCGACAGGTGAGTCTTGCAGTCAAGCTCCCTTCTACCTTTGCAC 804242 Query 118 T 118 | Sbjct 804241 T 804241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351999960400