Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20glumipatula_20[genbank_20GCA_5F000576495.1_202014-02-26]
12 sequences; 372,860,283 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq10 98.7 2e-18
>seq10
Length=28350858
Score = 98.7 bits (108), Expect = 2e-18
Identities = 96/121 (79%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || |||
Sbjct 10299137 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCTAGT 10299080
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| ||||||||||| | |||||||||||| ||||| ||||||||||||||||||| || |
Sbjct 10299079 GGTGCGAAGCTACCGTGTGCTGGATTATGACTGAATGCCTCTAAGTCAGAATCCAAGCTA 10299020
Query 121 G 121
|
Sbjct 10299019 G 10299019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199904768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |