Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq10 342 1e-91 seq8 342 1e-91 seq4 342 1e-91 seq3 342 1e-91 seq2 268 2e-69 seq5 223 7e-56 seq1 183 6e-44 seq9 143 6e-32 >seq10 Length=17164355 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 84889 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 84830 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 84829 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 84770 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 84769 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 84710 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 84709 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 84650 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 84649 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 84590 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 84589 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 84537 Score = 73.4 bits (80), Expect = 8e-11 Identities = 74/94 (79%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 192 ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACC 251 ||||| | | | || ||| ||||||| || ||||||| ||||| || || |||||||| Sbjct 12941301 ACCTTTCGGAATTGGACAGCCGTCAGCCCCCATACATCATCTTGTGATTTTGCAGAAACT 12941242 Query 252 TGTGTTTTTGGTAAA--CAGTCGCT-TGGGCCTA 282 ||||||||||||||| |||| || ||||||| Sbjct 12941241 TGTGTTTTTGGTAAAAGGAGTCACTCAGGGCCTA 12941208 >seq8 Length=23026653 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 17310718 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 17310659 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17310658 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 17310599 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 17310598 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 17310539 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 17310538 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 17310479 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 17310478 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 17310419 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 17310418 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 17310366 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 17334959 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 17335018 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17335019 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 17335078 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 17335079 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 17335138 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 17335139 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 17335198 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 17335199 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 17335258 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 17335259 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 17335311 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 17341858 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 17341917 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17341918 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 17341977 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 17341978 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 17342037 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 17342038 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 17342097 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 17342098 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 17342157 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 17342158 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 17342210 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 17342411 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 17342470 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17342471 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 17342530 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 17342531 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 17342590 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 17342591 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 17342650 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 17342651 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 17342710 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 17342711 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 17342763 Score = 123 bits (136), Expect = 5e-26 Identities = 167/237 (70%), Gaps = 33/237 (14%) Strand=Plus/Minus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 |||| || |||||||||||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct 748816 GAGATAGAGCCCAAATCGTTACACCTTTTGTGTGGGTCAGAACTTACCCGACAAGGAATT 748757 Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT--------AAGT 158 |||||||||||||| |||||||| || ||||||| | | Sbjct 748756 TCGCTACCTTAGGA---------------CCGCCGTTCACCGGGGCTTCAATCGCCGACT 748712 Query 159 TCACTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGC 218 | ||| | | | || |||| |||||| |||| | || ||||| | |||| Sbjct 748711 TTCCTGTTATCAGTTCTTTAAC----TTTCTTAACTTTCCGGTACTGGGCAAGTATCAGT 748656 Query 219 TCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTT------GGTAAACAG 269 ||| |||||| ||||||||||| ||||| || | ||||||| ||||||||| Sbjct 748655 TCCCATACATGATCTTGCGACTTTGCAGAGACATATGTTTTTTTTTTAGGTAAACAG 748599 >seq4 Length=32292456 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 2818655 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 2818596 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2818595 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 2818536 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 2818535 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 2818476 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 2818475 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 2818416 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 2818415 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 2818356 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 2818355 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 2818303 >seq3 Length=46202548 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 13393352 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 13393411 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13393412 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 13393471 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 13393472 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 13393531 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 13393532 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 13393591 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 13393592 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 13393651 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 13393652 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 13393704 Score = 342 bits (378), Expect = 1e-91 Identities = 289/353 (82%), Gaps = 7/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 13413437 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 13413496 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13413497 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 13413556 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||||| | | || | || Sbjct 13413557 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGTTCACCA 13413616 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 13413617 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 13413676 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG 302 || || ||||||||||||||||||||||||| |||||| || ||||| || | | Sbjct 13413677 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTG 13413736 Query 303 ACA---GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 13413737 CGAGGGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 13413789 Score = 105 bits (116), Expect = 1e-20 Identities = 114/151 (75%), Gaps = 10/151 (7%) Strand=Plus/Plus Query 192 ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACC 251 |||||||||||||||||||| ||||| ||||||||||| || | |||||| ||| || Sbjct 35250746 ACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGTAGAGTCC 35250805 Query 252 TGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC------ATAGACA 305 ||||||||| |||||||||||| ||| | | ||| || | | | ||| | Sbjct 35250806 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATA 35250865 Query 306 G----GCACCCCTTCTCCCTAAGTTACGGGG 332 | |||||||||||||| ||||||||||| Sbjct 35250866 GGAGAGCACCCCTTCTCCCGAAGTTACGGGG 35250896 >seq2 Length=36083738 Score = 268 bits (296), Expect = 2e-69 Identities = 285/376 (76%), Gaps = 20/376 (5%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 20559856 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 20559915 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 20559916 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 20559975 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| ||||||| |||| ||| | | || Sbjct 20559976 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATCAC 20560027 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| |||||||||||||||||||| ||||| ||||||||||| || | | Sbjct 20560028 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 20560087 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||||| ||||||||||| |||||||||||| ||| | | ||| || | | Sbjct 20560088 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 20560147 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 20560148 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 20560207 Query 349 CTTAACAATAGTTCTC 364 ||| || |||||| Sbjct 20560208 CTTCGACATGGTTCTC 20560223 >seq5 Length=25164199 Score = 223 bits (246), Expect = 7e-56 Identities = 215/276 (78%), Gaps = 10/276 (4%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 2351170 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 2351229 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 2351230 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 2351289 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| ||||||| |||| ||| | | || Sbjct 2351290 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATCAC 2351341 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| |||||||||||||||||||| ||||| ||||||||||| || | | Sbjct 2351342 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 2351401 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 ||||||||| ||||||||||| |||||||||||| Sbjct 2351402 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCT 2351437 Score = 91.5 bits (100), Expect = 3e-16 Identities = 85/106 (80%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 250 CCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGG-- 307 |||||||||||||||||||||||| |||||| || ||||| || | | ||| Sbjct 14474829 CCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTTGCGAGGGG 14474770 Query 308 -CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct 14474769 GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAG-TCCTTA 14474725 >seq1 Length=43445878 Score = 183 bits (202), Expect = 6e-44 Identities = 182/236 (77%), Gaps = 15/236 (6%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| || || | |||||||||||||| | |||||||| |||| | Sbjct 6505928 GCATCTTCACAGGCATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTACCCAG-----T 6505982 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 | |||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct 6505983 ATGCCTTTCGTGTGGGTCGGAACTTACCCGACAAGGATTTTGGCTACCTTAGGACCGTTA 6506042 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||| || ||||||| || | |||| | | | ||| || Sbjct 6506043 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGACTTCCCTGTC---ATCAGTTCA 6506099 Query 187 CC-------TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG 235 || || ||||||| ||| |||||||||||||| || |||||| |||||| Sbjct 6506100 CCAACTTCATTGACCTTCCGGCATTGGGCAGGCGTCAGCCCCCATACATGGTCTTG 6506155 >seq9 Length=22605696 Score = 143 bits (158), Expect = 6e-32 Identities = 132/167 (79%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 16999391 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCAGAGACAGCGGGGCA 16999450 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 16999451 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 16999510 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT 167 | |||| |||||| |||||| ||||| ||||||| |||| |||| Sbjct 16999511 CAGTTAGAGTTACTGCCGCCATTTACCGGGGCTTCCATTCAAAGCTT 16999557 Score = 118 bits (130), Expect = 2e-24 Identities = 122/160 (76%), Gaps = 10/160 (6%) Strand=Plus/Plus Query 117 AGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTC 176 ||||| |||| |||||| |||||||||||| ||||||| || | |||| Sbjct 12544041 AGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTTAAAGCTTA-------- 12544092 Query 177 TAACAGATCCCCTTA--ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT 234 | ||| || |||| |||||||||||||||||||| ||||| ||||||| ||| || Sbjct 12544093 TCACACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACACCGTGTT 12544152 Query 235 GCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | |||||||||| ||||||||||| |||||||||||| Sbjct 12544153 ACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCT 12544192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062297074688