Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq10 181 4e-43 seq8 181 4e-43 seq4 181 4e-43 seq3 181 4e-43 seq2 181 4e-43 seq6 116 1e-23 seq7 86.0 2e-14 >seq10 Length=17164355 Score = 181 bits (200), Expect = 4e-43 Identities = 395/582 (68%), Gaps = 36/582 (6%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 83415 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 83474 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | | | | || |||||||||||| ||| |||||||| ||| Sbjct 83475 ACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATC 83534 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 83535 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 83594 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATCG-GGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 83595 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 83649 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC---AT--- 290 || | ||| | | | ||||||| | |||||||| |||| | || Sbjct 83650 TCGG-TGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGAC 83708 Query 291 -CAGTTTTACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCG 337 || || | ||| |||||| ||||| | |||| | | | || Sbjct 83709 CCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCG 83768 Query 338 AGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAAC 397 ||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 83769 AGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAG 83826 Query 398 GAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAG 457 || || | ||| |||||||| |||| ||| || | |||||||||| | ||||||||| Sbjct 83827 GAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTTAAAGAG 83885 Query 458 TGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTC 517 ||||||| |||||||| ||||| | ||| || || | |||| |||| || Sbjct 83886 TGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGG-GCTAAGCGATC 83944 Query 518 TACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 | ||||||| ||||||| | | ||| |||||||||||||| Sbjct 83945 TGCCGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 83985 >seq8 Length=23026653 Score = 181 bits (200), Expect = 4e-43 Identities = 395/582 (68%), Gaps = 36/582 (6%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 17343885 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 17343826 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | | | | || |||||||||||| ||| |||||||| ||| Sbjct 17343825 ACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATC 17343766 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 17343765 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 17343706 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATCG-GGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 17343705 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 17343651 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC---AT--- 290 || | ||| | | | ||||||| | |||||||| |||| | || Sbjct 17343650 TCGG-TGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGAC 17343592 Query 291 -CAGTTTTACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCG 337 || || | ||| |||||| ||||| | |||| | | | || Sbjct 17343591 CCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCG 17343532 Query 338 AGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAAC 397 ||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 17343531 AGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAG 17343474 Query 398 GAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAG 457 || || | ||| |||||||| |||| ||| || | |||||||||| | ||||||||| Sbjct 17343473 GAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTTAAAGAG 17343415 Query 458 TGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTC 517 ||||||| |||||||| ||||| | ||| || || | |||| |||| || Sbjct 17343414 TGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGG-GCTAAGCGATC 17343356 Query 518 TACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 | ||||||| ||||||| | | ||| |||||||||||||| Sbjct 17343355 TGCCGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 17343315 Score = 149 bits (164), Expect = 2e-33 Identities = 334/492 (68%), Gaps = 36/492 (7%) Strand=Plus/Minus Query 92 GAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGG 151 |||||||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| | Sbjct 17336344 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 17336285 Query 152 CTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTA 211 | | | ||| || |||||||||||| |||||| || ||| || ||| Sbjct 17336284 CCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGC----AGT- 17336230 Query 212 TCAC----CATCG-GGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAA 266 | || |||| |||||| ||||||||| || | ||| | | | ||||||| Sbjct 17336229 TGACTGGACATCTAGGGGTAAAGCACTGTTTCGG-TGCGGGCTGCGCGAGCGGTACCAAA 17336171 Query 267 CCATTGCAAACTCCGAATGCGC---AT----CAGTTTTACCGCGGG------------AG 307 | |||||||| |||| | || || || | ||| || Sbjct 17336170 TCGAGGCAAACTCTGAATACTAGATATGACCCAAAAATAACAGGGGTCAAGGTCGGCCAG 17336111 Query 308 TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAG 367 |||| ||||| | |||| | | | ||||||| || | ||||| | |||||||| Sbjct 17336110 TGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAG 17336051 Query 368 GCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGT 427 ||||| ||||||| ||| ||| | | || || || | ||| |||||||| |||| || Sbjct 17336050 GCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTGGGGGTGCAAAGACAGCCAGGAGGT 17335993 Query 428 TGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGG 487 | || | |||||||||| | |||||||||||||||| |||||||| ||||| | Sbjct 17335992 TTGCCTAGAAGCAGCCA-CCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCCTT 17335934 Query 488 GCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG-AT 546 ||| || || | |||| |||| ||| ||||||| ||||||| | | ||| || Sbjct 17335933 GCGCTGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTCAAAATGCAT 17335876 Query 547 CGGTAGGGGAGC 558 |||||||||||| Sbjct 17335875 CGGTAGGGGAGC 17335864 Score = 120 bits (132), Expect = 1e-24 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||| ||| | |||||||| ||||| Sbjct 17337204 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCTGAACCTGGGTGATCTATCCATG 17337145 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | | | | || |||||||||||| ||| |||||||| ||| Sbjct 17337144 ACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATC 17337085 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 17337084 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 17337025 Query 182 CCGAAA 187 |||||| Sbjct 17337024 CCGAAA 17337019 Score = 105 bits (116), Expect = 2e-20 Identities = 180/255 (71%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 17309564 AGTGAGACGATGGG-GATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 17309622 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||| | ||||||| || ||| | | || || || | ||| |||||||| |||| Sbjct 17309623 AGGCCTCTAAATGACCACTCAGTGATA--AAGGAGGTGGGGGTGCAAAGACAGCCAGGAG 17309680 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTC 485 ||| || | |||||||||| | |||||||||||||||| |||||||| ||||| | Sbjct 17309681 GTTTGCCTAGAAGCAGCCACCC-TTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCC 17309739 Query 486 GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACC-GAAGCAGTGGGATCATTTATATG 544 ||| || || | |||| | ||| ||| || |||| ||||||| | ||| Sbjct 17309740 TTGCGCTGAAGATGAACGGGGCTAAAGCGATCTGCCAAAAGCTGTGGGATGTCAAAAATG 17309799 Query 545 -ATCGGTAGGGGAGC 558 |||||||||||||| Sbjct 17309800 CATCGGTAGGGGAGC 17309814 >seq4 Length=32292456 Score = 181 bits (200), Expect = 4e-43 Identities = 395/582 (68%), Gaps = 36/582 (6%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 2817181 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 2817240 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | | | | || |||||||||||| ||| |||||||| ||| Sbjct 2817241 ACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATC 2817300 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 2817301 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 2817360 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATCG-GGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 2817361 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 2817415 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC---AT--- 290 || | ||| | | | ||||||| | |||||||| |||| | || Sbjct 2817416 TCGG-TGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGAC 2817474 Query 291 -CAGTTTTACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCG 337 || || | ||| |||||| ||||| | |||| | | | || Sbjct 2817475 CCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCG 2817534 Query 338 AGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAAC 397 ||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 2817535 AGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAG 2817592 Query 398 GAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAG 457 || || | ||| |||||||| |||| ||| || | |||||||||| | ||||||||| Sbjct 2817593 GAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTTAAAGAG 2817651 Query 458 TGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTC 517 ||||||| |||||||| ||||| | ||| || || | |||| |||| || Sbjct 2817652 TGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGG-GCTAAGCGATC 2817710 Query 518 TACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 | ||||||| ||||||| | | ||| |||||||||||||| Sbjct 2817711 TGCCGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 2817751 Score = 114 bits (126), Expect = 4e-23 Identities = 128/170 (75%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 |||| |||||| | |||||| ||||| |||| ||||| | | ||||| ||| |||| Sbjct 7790207 GACCGGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGATCTCTAACAGGCCTTGGA 7790266 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| || | ||||| |||||||| ||||| |||||||||||| | Sbjct 7790267 GGACCGAACCCACGTGTGCGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGACC 7790326 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || ||| | || |||||||||| || ||||| |||||| |||| || Sbjct 7790327 AACCAAGATCAGATATAGCTGGTTTTCCACGAAATCTATTTCAGTAGAGC 7790376 >seq3 Length=46202548 Score = 181 bits (200), Expect = 4e-43 Identities = 395/582 (68%), Gaps = 36/582 (6%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 13414911 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 13414852 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | | | | || |||||||||||| ||| |||||||| ||| Sbjct 13414851 ACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCCGAACCGACTGATGTTGAAGAATC 13414792 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 13414791 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 13414732 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATCG-GGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 13414731 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 13414677 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC---AT--- 290 || | ||| | | | ||||||| | |||||||| |||| | || Sbjct 13414676 TCGG-TGCGGGCTGCGCGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGAC 13414618 Query 291 -CAGTTTTACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCG 337 || || | ||| |||||| ||||| | |||| | | | || Sbjct 13414617 CCAAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCG 13414558 Query 338 AGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAAC 397 ||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 13414557 AGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAG 13414500 Query 398 GAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAG 457 || || | ||| |||||||| |||| ||| || | |||||||||| | ||||||||| Sbjct 13414499 GAGGTGGGGGTGCAAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTTAAAGAG 13414441 Query 458 TGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTC 517 ||||||| |||||||| ||||| | ||| || || | |||| |||| || Sbjct 13414440 TGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGG-GCTAAGCGATC 13414382 Query 518 TACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 | ||||||| ||||||| | | ||| |||||||||||||| Sbjct 13414381 TGCCGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 13414341 Score = 109 bits (120), Expect = 2e-21 Identities = 181/254 (71%), Gaps = 7/254 (3%) Strand=Plus/Minus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 13394667 AGTGAGACGATGGG-GATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 13394609 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||| | ||||||| || ||| | | || || || | ||| |||||||| |||| Sbjct 13394608 AGGCCTCTAAATGACCACTCAGTGATA--AAGGAGGTGGGGGTGCAAAGACAGCCAGGAG 13394551 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTC 485 ||| || | |||||||||| | |||||||||||||||| |||||||| ||||| | Sbjct 13394550 GTTTGCCTAGAAGCAGCCACCC-TTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCC 13394492 Query 486 GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG- 544 ||| || || | |||| |||| ||| || |||| ||||||| | | ||| Sbjct 13394491 TTGCGCTGAAGATGAACGGG-GCTAAGCGATCTGCCAAAGCTGTGGGAT-GTCAAAATGC 13394434 Query 545 ATCGGTAGGGGAGC 558 |||||||||||||| Sbjct 13394433 ATCGGTAGGGGAGC 13394420 >seq2 Length=36083738 Score = 181 bits (200), Expect = 4e-43 Identities = 322/462 (70%), Gaps = 27/462 (6%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 20561728 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 20561669 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 20561668 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 20561609 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 20561608 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 20561551 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG----TCATTGCGACTTACCAAA 266 | || | | ||||||||||| |||||||| | |||| || ||||||| Sbjct 20561550 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAAC 20561491 Query 267 CCATTGCAAACTCCGAATGC------GCATCAGTTTTACCGCGGGAGTGAGGGCATGGGT 320 || | ||||||||||| | |||| | ||| | || ||| ||||| Sbjct 20561490 CCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGA----TTGGGT 20561435 Query 321 GCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGAC 380 |||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 20561434 GCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAAT 20561375 Query 381 AGCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAG 438 || ||| || || |||| |||| || | |||| | |||| || |||||||||| Sbjct 20561374 CACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAG 20561319 Query 439 CAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||| || ||| |||| |||||| |||||||| ||| || Sbjct 20561318 CAGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 20561278 >seq6 Length=30401905 Score = 116 bits (128), Expect = 1e-23 Identities = 182/254 (72%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 25025884 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 25025943 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| ||||||| ||| ||| | | || || || | ||| |||||||| |||| Sbjct 25025944 AGGCCCCTAAATGACCGCTTAGTGATA--AAGGAGGTGGGGGTGCAAAGACAGCCAGGAG 25026001 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTC 485 ||| || | |||||||||| | |||||||||||||||| |||||||| ||||| | Sbjct 25026002 GTTTGCCTAGAAGCAGCCA-CCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCC 25026060 Query 486 GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG- 544 | | || | | |||| |||| ||| ||||||| ||||||| | | ||| Sbjct 25026061 TTGTGCTGAAGACGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTCAAAATGC 25026118 Query 545 ATCGGTAGGGGAGC 558 |||||||||||||| Sbjct 25026119 ATCGGTAGGGGAGC 25026132 Score = 107 bits (118), Expect = 6e-21 Identities = 130/175 (74%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 25749827 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 25749886 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| ||||||| ||| ||| | | || || || | ||| || ||||| |||| Sbjct 25749887 AGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTGGGGGTGCAAAAACAGCCAGGAG 25749944 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||| || | |||||||||| | |||||||||||||||| |||||||| ||||| Sbjct 25749945 GTTTGCCTAGAAGCAGCCA-CCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAG 25749998 >seq7 Length=26479886 Score = 86.0 bits (94), Expect = 2e-14 Identities = 120/166 (72%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 16729525 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 16729466 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| ||||||| ||| ||| | | || || || | ||| |||| ||| |||| Sbjct 16729465 AGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTGGGGGTGCAAAGATAGCAAGGAG 16729408 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCA 471 ||| || | |||||| ||| | |||||||||||||| | | |||| Sbjct 16729407 GTTTGCCTAGAAGCAACCA-CCCTTTAAAGAGTGCGTTATATCTCA 16729363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689436311552