Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq5 201 4e-49 seq2 201 4e-49 seq10 183 1e-43 seq8 183 1e-43 seq4 183 1e-43 seq3 183 1e-43 seq9 176 2e-41 seq1 109 2e-21 >seq5 Length=25164199 Score = 201 bits (222), Expect = 4e-49 Identities = 388/570 (68%), Gaps = 42/570 (7%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||| || ||| | | |||| ||||| | | || | | Sbjct 2350860 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--C 2350917 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | |||| ||||| | | |||||||||| ||| ||||| || ||||||||| Sbjct 2350918 AAC--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 2350974 Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATA 175 ||||||||||||| ||| |||||| | ||| || || || | |||||| | Sbjct 2350975 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCA 2351034 Query 176 TCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235 ||| | |||||||| ||||| | | || | | ||| | || | Sbjct 2351035 TCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC 2351085 Query 236 ATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 |||||||||||||||||| | | || || | | |||||||||| ||| Sbjct 2351086 ------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAG 2351139 Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 || | ||||||||| |||| |||| | | ||||||| || | | |||||| Sbjct 2351140 GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTT 2351199 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 ||||||| | || |||||||| ||| ||||||||| |||||||||||||||| ||| Sbjct 2351200 CACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACT 2351259 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 || |||||||||||||||||||||||||| |||| |||||| ||||||||||| ||| Sbjct 2351260 TATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGG 2351319 Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534 ||||| ||| || | ||||| | |||| ||||||||| Sbjct 2351320 GCTTCCATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAG 2351363 Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| ||||| | ||||| ||| Sbjct 2351364 CACCGGGCAGGTGTCAGACTCTATACATCG 2351393 >seq2 Length=36083738 Score = 201 bits (222), Expect = 4e-49 Identities = 388/570 (68%), Gaps = 42/570 (7%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || ||||| |||||| || ||| | | |||| ||||| | | || | | Sbjct 20559546 TCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAAT--C 20559603 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | |||| ||||| | | |||||||||| ||| ||||| || ||||||||| Sbjct 20559604 AAC--GCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAG 20559660 Query 121 TTAAACTACCCACCAGGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATA 175 ||||||||||||| ||| |||||| | ||| || || || | |||||| | Sbjct 20559661 ATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCA 20559720 Query 176 TCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATC 235 ||| | |||||||| ||||| | | || | | ||| | || | Sbjct 20559721 TCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG-TCG--------TTGTGTGTCACCACC 20559771 Query 236 ATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAG 295 |||||||||||||||||| | | || || | | |||||||||| ||| Sbjct 20559772 ------TCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAG 20559825 Query 296 GTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTT 354 || | ||||||||| |||| |||| | | ||||||| || | | |||||| Sbjct 20559826 GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTT 20559885 Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 ||||||| | || |||||||| ||| ||||||||| |||||||||||||||| ||| Sbjct 20559886 CACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACT 20559945 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 || |||||||||||||||||||||||||| |||| |||||| ||||||||||| ||| Sbjct 20559946 TATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGG 20560005 Query 475 GCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAG 534 ||||| ||| || | ||||| | |||| ||||||||| Sbjct 20560006 GCTTCCATTCAAAGCTTATCACACTTC----------------TCCTTCCGACCTTCCAG 20560049 Query 535 CACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| ||||| | ||||| ||| Sbjct 20560050 CACCGGGCAGGTGTCAGACTCTATACATCG 20560079 Score = 84.2 bits (92), Expect = 7e-14 Identities = 109/147 (74%), Gaps = 3/147 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || Sbjct 16820690 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTA 16820748 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | | |||| |||||||| |||||||||||| |||||||||| | | ||||||| Sbjct 16820749 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCA 16820807 Query 120 GTTAAACTACCCACCAGGCACTGTCCC 146 ||||| | ||| | |||||||| Sbjct 16820808 TAGAAACTGTCTACCTGAGACTGTCCC 16820834 >seq10 Length=17164355 Score = 183 bits (202), Expect = 1e-43 Identities = 394/572 (69%), Gaps = 28/572 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || | Sbjct 85221 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 85163 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 85162 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 85104 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176 ||||| | ||| | |||||||| || | || || |||||||||| || Sbjct 85103 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 85046 Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232 || | | ||||||||||| ||| | | ||| | | || || | |||| Sbjct 85045 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 84988 Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290 || | | || ||||||| || | || || || | || |||||| ||| | | || Sbjct 84987 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 84931 Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349 | ||| | | |||||||| |||| | || | | ||||||| || | | Sbjct 84930 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 84871 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | || | ||||||| | || |||||||||| ||||||| |||| Sbjct 84870 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 84812 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 84811 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 84752 Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528 || |||||||| | || || | || || | | |||| | ||| ||| Sbjct 84751 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 84698 Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| |||| ||||||||||||| || |||| Sbjct 84697 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 84666 >seq8 Length=23026653 Score = 183 bits (202), Expect = 1e-43 Identities = 394/572 (69%), Gaps = 28/572 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || | Sbjct 17311050 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 17310992 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 17310991 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 17310933 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176 ||||| | ||| | |||||||| || | || || |||||||||| || Sbjct 17310932 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 17310875 Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232 || | | ||||||||||| ||| | | ||| | | || || | |||| Sbjct 17310874 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 17310817 Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290 || | | || ||||||| || | || || || | || |||||| ||| | | || Sbjct 17310816 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 17310760 Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349 | ||| | | |||||||| |||| | || | | ||||||| || | | Sbjct 17310759 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 17310700 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | || | ||||||| | || |||||||||| ||||||| |||| Sbjct 17310699 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 17310641 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 17310640 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 17310581 Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528 || |||||||| | || || | || || | | |||| | ||| ||| Sbjct 17310580 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 17310527 Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| |||| ||||||||||||| || |||| Sbjct 17310526 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 17310495 Score = 183 bits (202), Expect = 1e-43 Identities = 394/572 (69%), Gaps = 28/572 (5%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || | Sbjct 17334627 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 17334685 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 17334686 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 17334744 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176 ||||| | ||| | |||||||| || | || || |||||||||| || Sbjct 17334745 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 17334802 Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232 || | | ||||||||||| ||| | | ||| | | || || | |||| Sbjct 17334803 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 17334860 Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290 || | | || ||||||| || | || || || | || |||||| ||| | | || Sbjct 17334861 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 17334917 Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349 | ||| | | |||||||| |||| | || | | ||||||| || | | Sbjct 17334918 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 17334977 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | || | ||||||| | || |||||||||| ||||||| |||| Sbjct 17334978 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 17335036 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 17335037 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 17335096 Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528 || |||||||| | || || | || || | | |||| | ||| ||| Sbjct 17335097 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 17335150 Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| |||| ||||||||||||| || |||| Sbjct 17335151 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 17335182 Score = 183 bits (202), Expect = 1e-43 Identities = 394/572 (69%), Gaps = 28/572 (5%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || | Sbjct 17341526 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 17341584 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 17341585 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 17341643 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176 ||||| | ||| | |||||||| || | || || |||||||||| || Sbjct 17341644 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 17341701 Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232 || | | ||||||||||| ||| | | ||| | | || || | |||| Sbjct 17341702 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 17341759 Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290 || | | || ||||||| || | || || || | || |||||| ||| | | || Sbjct 17341760 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 17341816 Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349 | ||| | | |||||||| |||| | || | | ||||||| || | | Sbjct 17341817 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 17341876 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | || | ||||||| | || |||||||||| ||||||| |||| Sbjct 17341877 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 17341935 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 17341936 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 17341995 Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528 || |||||||| | || || | || || | | |||| | ||| ||| Sbjct 17341996 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 17342049 Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| |||| ||||||||||||| || |||| Sbjct 17342050 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 17342081 Score = 141 bits (156), Expect = 3e-31 Identities = 136/175 (78%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 17342466 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 17342525 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505 ||||||||||| |||||||| || |||||||| | || || | || || Sbjct 17342526 CGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCA 17342579 Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | | |||| | ||| ||||||| |||| ||||||||||||| || |||| Sbjct 17342580 TCAGTTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 17342634 Score = 80.6 bits (88), Expect = 9e-13 Identities = 74/97 (76%), Gaps = 15/97 (15%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| || || ||| |||| |||||||||||||||||||||||||||||||||| Sbjct 748801 TCGTTACACCTTTTGTGTGGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGG-- 748744 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 ||||||||| || ||||||||||| Sbjct 748743 -------------ACCGCCGTTCACCGGGGCTTCAAT 748720 >seq4 Length=32292456 Score = 183 bits (202), Expect = 1e-43 Identities = 394/572 (69%), Gaps = 28/572 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || | Sbjct 2818987 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 2818929 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 2818928 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 2818870 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176 ||||| | ||| | |||||||| || | || || |||||||||| || Sbjct 2818869 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 2818812 Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232 || | | ||||||||||| ||| | | ||| | | || || | |||| Sbjct 2818811 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 2818754 Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290 || | | || ||||||| || | || || || | || |||||| ||| | | || Sbjct 2818753 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 2818697 Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349 | ||| | | |||||||| |||| | || | | ||||||| || | | Sbjct 2818696 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 2818637 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | || | ||||||| | || |||||||||| ||||||| |||| Sbjct 2818636 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 2818578 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 2818577 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 2818518 Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528 || |||||||| | || || | || || | | |||| | ||| ||| Sbjct 2818517 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 2818464 Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| |||| ||||||||||||| || |||| Sbjct 2818463 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 2818432 >seq3 Length=46202548 Score = 183 bits (202), Expect = 1e-43 Identities = 394/572 (69%), Gaps = 28/572 (5%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| || ||||| |||||||||||||||| ||| || ||||| | ||| || | Sbjct 13413105 TCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCA-ATGTC 13413163 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | | | | |||| |||||||| |||||||||||| |||||||||| | || |||||| Sbjct 13413164 CGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCA 13413222 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGA---TCATGGGCCAAGGTTAGATAT 176 ||||| | ||| | |||||||| || | || || |||||||||| || Sbjct 13413223 TAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGCGGGTC-TGACACAAGGTTAGA-AT 13413280 Query 177 CC-ACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGC 232 || | | ||||||||||| ||| | | ||| | | || || | |||| Sbjct 13413281 CCGAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGG-GGCCT- 13413338 Query 233 ATCATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAG 290 || | | || ||||||| || | || || || | || |||||| ||| | | || Sbjct 13413339 -TCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAG 13413395 Query 291 TGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGC 349 | ||| | | |||||||| |||| | || | | ||||||| || | | Sbjct 13413396 TAAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTC 13413455 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTC 408 ||||||||| | || | ||||||| | || |||||||||| ||||||| |||| Sbjct 13413456 TATTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTC 13413514 Query 409 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTT 468 |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 13413515 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTC 13413574 Query 469 ACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACC 528 || |||||||| | || || | || || | | |||| | ||| ||| Sbjct 13413575 ACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCATCAGTTCACCAACTTCCTTGACC 13413628 Query 529 TTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 |||| |||| ||||||||||||| || |||| Sbjct 13413629 TTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 13413660 Score = 141 bits (156), Expect = 3e-31 Identities = 136/175 (78%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 13393407 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 13393466 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505 ||||||||||| |||||||| || |||||||| | || || | || || Sbjct 13393467 CGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTT------CCCTGTCA 13393520 Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | | |||| | ||| ||||||| |||| ||||||||||||| || |||| Sbjct 13393521 TCAGTTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATAC 13393575 >seq9 Length=22605696 Score = 176 bits (194), Expect = 2e-41 Identities = 186/244 (76%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||||||||||||||||| | | || || | | |||||||||| ||||| | Sbjct 16999306 CTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTCAAGGTGCA 16999365 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| | || |||| | | ||||||| || | | ||||||||||| Sbjct 16999366 CGGGGTCTTACCATCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 16999425 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 || | || |||||||| ||| ||||||||| |||||||||||||||| ||||| | Sbjct 16999426 GGTCCATGTCAGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 16999485 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| |||| |||||| ||||| ||||| |||||||| Sbjct 16999486 GACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCATTTACCGGGGCTTC 16999545 Query 480 AATT 483 ||| Sbjct 16999546 CATT 16999549 >seq1 Length=43445878 Score = 109 bits (120), Expect = 2e-21 Identities = 78/90 (87%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 390 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTT 449 || ||| |||||| ||||||||||||||||||||||| ||| |||||||||||| ||| Sbjct 6505982 TATGCCTTTCGTGTGGGTCGGAACTTACCCGACAAGGATTTTGGCTACCTTAGGACCGTT 6506041 Query 450 ATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||| |||||||| || |||||||| Sbjct 6506042 ATAGTTACGGCCGCCGTTCACCGGGGCTTC 6506071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702235071488