Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq10 679 0.0
seq8 679 0.0
seq7 679 0.0
seq5 170 2e-37
seq11 102 9e-17
seq3 96.9 4e-15
seq6 93.3 5e-14
>seq10
Length=17164355
Score = 679 bits (752), Expect = 0.0
Identities = 745/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921
|||||||| || | ||| | |||||| |||| || || |||||||||||||||| ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981
|| || || || ||||| || ||||| || || ||||||| | | ||||| |||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101
||||||||| ||||| | || |||||| | || || || ||||||| | || | ||
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161
| |||||| | | || | | ||||||||||||||||||||||| || |||
Sbjct 15960665 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 15960724
Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221
||| ||||||||||| ||||| ||||||||| || ||||| || || |||||| | ||
Sbjct 15960725 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 15960784
Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281
||| ||| | | ||||| | ||||| || |||||| |||| ||||||| | || ||
Sbjct 15960785 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 15960844
Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341
||||||||||| |||| |||| |||||||||| ||||| || || ||||||||||||||
Sbjct 15960845 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 15960904
Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401
|| |||||| | ||||| ||||| |||||||| || || || ||| ||||||||||||
Sbjct 15960905 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 15960964
Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461
|| |||| || |||||| | |||| || || || |||| || || || | ||
Sbjct 15960965 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 15961024
Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521
||||| || |||||||||||||||||||| || || || || || ||||| || || ||
Sbjct 15961025 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 15961084
Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581
|| || |||||||||||||| ||||||||||| || ||| | ||||||||| | ||
Sbjct 15961085 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 15961144
Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641
|||||||||||| || || || ||||||||||| | ||| || ||| ||||| |||||
Sbjct 15961145 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 15961204
Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701
||| || || ||||| |||||||| || | | || | |||||| | ||| | || ||
Sbjct 15961205 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 15961264
Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761
|||||| || | | ||||| ||| ||| || |||||||| |||||||| ||||| ||
Sbjct 15961265 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 15961324
Query 160762 TCACAACTTCCCTCTCGACCTTGCTGCT 160789
||||||||||||||| ||||| ||||||
Sbjct 15961325 TCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 679 bits (752), Expect = 0.0
Identities = 745/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921
|||||||| || | ||| | |||||| |||| || || |||||||||||||||| ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981
|| || || || ||||| || ||||| || || ||||||| | | ||||| |||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101
||||||||| ||||| | || |||||| | || || || ||||||| | || | ||
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161
| |||||| | | || | | ||||||||||||||||||||||| || |||
Sbjct 17290755 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 17290814
Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221
||| ||||||||||| ||||| ||||||||| || ||||| || || |||||| | ||
Sbjct 17290815 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 17290874
Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281
||| ||| | | ||||| | ||||| || |||||| |||| ||||||| | || ||
Sbjct 17290875 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 17290934
Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341
||||||||||| |||| |||| |||||||||| ||||| || || ||||||||||||||
Sbjct 17290935 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 17290994
Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401
|| |||||| | ||||| ||||| |||||||| || || || ||| ||||||||||||
Sbjct 17290995 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 17291054
Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461
|| |||| || |||||| | |||| || || || |||| || || || | ||
Sbjct 17291055 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 17291114
Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521
||||| || |||||||||||||||||||| || || || || || ||||| || || ||
Sbjct 17291115 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 17291174
Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581
|| || |||||||||||||| ||||||||||| || ||| | ||||||||| | ||
Sbjct 17291175 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 17291234
Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641
|||||||||||| || || || ||||||||||| | ||| || ||| ||||| |||||
Sbjct 17291235 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 17291294
Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701
||| || || ||||| |||||||| || | | || | |||||| | ||| | || ||
Sbjct 17291295 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 17291354
Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761
|||||| || | | ||||| ||| ||| || |||||||| |||||||| ||||| ||
Sbjct 17291355 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 17291414
Query 160762 TCACAACTTCCCTCTCGACCTTGCTGCT 160789
||||||||||||||| ||||| ||||||
Sbjct 17291415 TCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 578 bits (640), Expect = 4e-160
Identities = 740/1012 (73%), Gaps = 7/1012 (1%)
Strand=Plus/Minus
Query 161527 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 161586
||||||||| | | | || ||||| |||||||| || |||||||| || | ||||||
Sbjct 17282597 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 17282538
Query 161587 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGG 161646
|| ||||||| | ||| | || |||||| |||| || || ||||| | || |||
Sbjct 17282537 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 17282478
Query 161647 TATACCCATGGACTCGCTAGTTCCTATCTTGAGGGT-GCAAATTTTCTTA-CAGCGGCAG 161704
|||||||||||| | || ||||||||| | || ||| |||| ||||||| | || ||||
Sbjct 17282477 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCAGCAG 17282420
Query 161705 TTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGGTCCTGAGGCTC 161764
|| ||| || || | | | | || ||| | | || || ||||| || || || |
Sbjct 17282419 TTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 17282360
Query 161765 AAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 161824
|||||||||| | ||| ||| | || || || |||| |||||| || ||||| |
Sbjct 17282359 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATG 17282300
Query 161825 GGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGT 161883
||||||| || || || || |||||| | ||||| |||||||||||||| ||| || |
Sbjct 17282299 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 17282240
Query 161884 ATCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTT 161943
| || ||||| ||||| ||| | |||||||| || || ||||||||||| ||| ||
Sbjct 17282239 -TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTC 17282181
Query 161944 CTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCT 162003
|| || ||||| ||||| || || |||||||| ||||| ||||| || || ||
Sbjct 17282180 CTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 17282121
Query 162004 ATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCAC 162063
|| || | ||| | || ||| | ||||| || || ||||||||| | || || || ||
Sbjct 17282120 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 17282061
Query 162064 ATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACT 162123
|||||||| || || || | || || | ||| |||| | |||||||| || | ||
Sbjct 17282060 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 17282001
Query 162124 GTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCT 162183
|| |||||||| || | | || ||||| |||||||| ||| |||||| || |
Sbjct 17282000 GTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 17281941
Query 162184 ACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTC 162243
|| |||| || || ||||| || ||||| || || || || || ||||| || |||||
Sbjct 17281940 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 17281881
Query 162244 GGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATG 162303
||| |||||||| ||||| |||||||| |||||||||||||| || || || ||||
Sbjct 17281880 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 17281821
Query 162304 GGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGAC 162363
||| | |||| ||| |||| || | | || || ||||| || || ||||| || |||
Sbjct 17281820 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 17281761
Query 162364 TTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAG 162423
|| || || ||||| || ||||||||||| |||||||||||||| || |||||||||||
Sbjct 17281760 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 17281701
Query 162424 AATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAG 162483
||||| || || || || ||| ||||||| ||| ||||| | ||||| || |||||
Sbjct 17281700 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 17281641
Query 162484 AACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535
|| || ||||||||||||| ||||| || | || ||||| || | |||||
Sbjct 17281640 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT-TTAATGG 17281590
Score = 140 bits (154), Expect = 4e-28
Identities = 156/207 (75%), Gaps = 1/207 (0%)
Strand=Plus/Plus
Query 160405 TCTGGTTACT-TCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTT 160463
||||| ||| |||||| | |||| || || || |||| || || || | ||||
Sbjct 13113443 TCTGGAGACTATCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTT 13113502
Query 160464 ACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTC 160523
|||| || |||||||||||||||||||| || || | || || ||||| || || || |
Sbjct 13113503 ACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTTGGCC 13113562
Query 160524 GTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTG 160583
| || |||||||||||||| ||||||||||| || ||| | ||||| ||| | ||||
Sbjct 13113563 GATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTGGCTG 13113622
Query 160584 CTTGGCCTGTTGTTGGAATCTGGTTCA 160610
|||||| ||| || || || |||||||
Sbjct 13113623 CTTGGCATGTAGTAGGGATTTGGTTCA 13113649
>seq7
Length=26479886
Score = 679 bits (752), Expect = 0.0
Identities = 745/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921
|||||||| || | ||| | |||||| |||| || || |||||||||||||||| ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981
|| || || || ||||| || ||||| || || ||||||| | | ||||| |||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101
||||||||| ||||| | || |||||| | || || || ||||||| | || | ||
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161
| |||||| | | || | | ||||||||||||||||||||||| || |||
Sbjct 22562484 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 22562543
Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221
||| ||||||||||| ||||| ||||||||| || ||||| || || |||||| | ||
Sbjct 22562544 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 22562603
Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281
||| ||| | | ||||| | ||||| || |||||| |||| ||||||| | || ||
Sbjct 22562604 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 22562663
Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341
||||||||||| |||| |||| |||||||||| ||||| || || ||||||||||||||
Sbjct 22562664 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 22562723
Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401
|| |||||| | ||||| ||||| |||||||| || || || ||| ||||||||||||
Sbjct 22562724 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 22562783
Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461
|| |||| || |||||| | |||| || || || |||| || || || | ||
Sbjct 22562784 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 22562843
Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521
||||| || |||||||||||||||||||| || || || || || ||||| || || ||
Sbjct 22562844 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 22562903
Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581
|| || |||||||||||||| ||||||||||| || ||| | ||||||||| | ||
Sbjct 22562904 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 22562963
Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641
|||||||||||| || || || ||||||||||| | ||| || ||| ||||| |||||
Sbjct 22562964 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 22563023
Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701
||| || || ||||| |||||||| || | | || | |||||| | ||| | || ||
Sbjct 22563024 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 22563083
Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761
|||||| || | | ||||| ||| ||| || |||||||| |||||||| ||||| ||
Sbjct 22563084 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 22563143
Query 160762 TCACAACTTCCCTCTCGACCTTGCTGCT 160789
||||||||||||||| ||||| ||||||
Sbjct 22563144 TCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 154 bits (170), Expect = 2e-32
Identities = 208/287 (72%), Gaps = 2/287 (1%)
Strand=Plus/Plus
Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921
|||||||| || | ||| | |||||| |||| || || |||||||||||||||| ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981
|| || || || |||| || |||| | || ||||||| | | ||||| |||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041
|| ||||||||||| || |||| |||| || || || | |||| || || ||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTT 160088
||||||||| ||||| | || |||||| | || || || |||||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146
>seq5
Length=25164199
Score = 170 bits (188), Expect = 2e-37
Identities = 190/254 (75%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 162157 GCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACT 162216
|||||||| ||| |||||| || | || |||| || || ||||| || || || ||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 162217 GCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCAT 162276
|| || || || ||||| || ||||| ||| |||||||| ||||| |||||||| |||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 162277 TTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGA 162336
||||||||||| || || || |||| ||| |||| ||| |||| || | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 162337 CTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGAT 162396
|| ||||| || || ||||| || ||||| || || ||| | || ||||||| ||| |||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 162397 CCTGAATTTGAAAC 162410
||||||||||| ||
Sbjct 21599375 CCTGAATTTGAGAC 21599388
>seq11
Length=21200727
Score = 102 bits (112), Expect = 9e-17
Identities = 106/138 (77%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 162398 CTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGT 162457
||||||| || || ||||||||||| ||||| || || || || ||| ||||||| |||
Sbjct 11535663 CTGAATTGGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGA 11535604
Query 162458 TGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAG 162517
||||| | ||||| || ||||| || || ||||||||||||| ||||| || | |
Sbjct 11535603 TGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTG 11535544
Query 162518 GTAACGCACTGTGAATGG 162535
| ||||| || | |||||
Sbjct 11535543 GAAACGCTCT-TTAATGG 11535527
>seq3
Length=46202548
Score = 96.9 bits (106), Expect = 4e-15
Identities = 123/168 (73%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 160601 ATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTC 160660
|| ||||||||||| | ||| || ||| ||||| |||||||| || || ||||| |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 160661 AACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAAC 160720
||||| || | | || | |||||| | ||| | | |||||||| || | | |||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 160721 CGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAAC 160768
|| || ||| | |||||||| |||||||| ||||| |||||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
>seq6
Length=30401905
Score = 93.3 bits (102), Expect = 5e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 162337 CTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGAT 162396
|| ||||| || | |||| || ||||| || | || || | |||||||| || ||
Sbjct 9625634 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAGAACAT 9625693
Query 162397 CCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGG 162456
||||||||||| || |||| |||||| ||||| || || || || || ||||||| |||
Sbjct 9625694 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 9625753
Query 162457 TTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512
|| | | |||| || ||| || || ||||||||||||| ||||| ||
Sbjct 9625754 ATGATAACTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCTACC 9625809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551309228366400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |