Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq9 131 9e-29 seq7 93.3 2e-17 >seq9 Length=18641908 Score = 131 bits (144), Expect = 9e-29 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| | |||||| || Sbjct 7125 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCC 7066 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 7065 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 7009 >seq7 Length=26849004 Score = 93.3 bits (102), Expect = 2e-17 Identities = 92/118 (78%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||||| ||||||||||| |||| | ||||| || Sbjct 5139267 GAACCCAAAGACTTTGGTTTCTCATAAGGTGCCGACGAAGTCCTACAAGCAACATTCGCC 5139208 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATC-TGATCGTCTTCGA 117 | |||||||| ||| ||||| | || |||||| ||||||||| |||| |||||||| Sbjct 5139207 AACCCCTAGTCAACATCGTTTATGATTTAGACTAGGACGGTATCTTGATTGTCTTCGA 5139150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399968680