Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27]
12 sequences; 335,668,232 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq8 87.8 2e-15
seq1 75.2 1e-11
>seq8
Length=21838022
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| || | | ||| ||
Sbjct 19546742 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCGCAAAAGG 19546801
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 19546802 G-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 19546850
>seq1
Length=41795227
Score = 75.2 bits (82), Expect = 1e-11
Identities = 78/101 (77%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTT-GAGTGAATCACGGTTAA 82
||||| |||||| || | || || ||||||| ||||| | ||| ||| || | ||
Sbjct 10686107 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAA 10686166
Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
|||||| |||||| |||||| |||||||||||| || ||||
Sbjct 10686167 GGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 10686207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531199938248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |