Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27]
12 sequences; 335,668,232 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq9 134 1e-29
seq11 73.4 4e-11
>seq9
Length=18641908
Score = 134 bits (148), Expect = 1e-29
Identities = 139/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 6765 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 6824
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 6825 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 6882
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 6883 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 6940
>seq11
Length=24454635
Score = 73.4 bits (80), Expect = 4e-11
Identities = 57/68 (84%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182
|||||||| |||| ||| ||||||||| | ||||| || |||| |||||||||||||
Sbjct 20467483 GTAATGATTAATAGGGACAGTCGGGGGCATTTGTATTTCATGGTCAGAGGTGAAATTCTT 20467424
Query 183 GGATTTAT 190
||||||||
Sbjct 20467423 GGATTTAT 20467416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511999940480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |