Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq6 77.0 5e-12 >seq6 Length=31808207 Score = 77.0 bits (84), Expect = 5e-12 Identities = 98/134 (73%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| | ||||| || ||| || || |||||||| || || || || Sbjct 2668358 CATGGAATGCTTCTT-GAGGAATATCAACGGACCCTACACGCTTCATACGCTTCTTTCCT 2668416 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 | ||||||||||| |||| ||| || || | | ||||| || ||||| ||||| Sbjct 2668417 TCTTTTTGCTTCTCTAGCAACTTCTTTTTGCGAGTAATATCACCACCATAGCACTTGGCA 2668476 Query 217 AGTACGTTCTTTCT 230 || || |||||||| Sbjct 2668477 AGAACATTCTTTCT 2668490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838399899392