Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq5 417 2e-114 seq7 361 2e-97 seq4 224 3e-56 seq9 192 2e-46 seq8 192 2e-46 seq6 192 2e-46 seq12 185 3e-44 seq11 111 5e-22 seq10 82.4 2e-13 >seq5 Length=35065507 Score = 417 bits (462), Expect = 2e-114 Identities = 393/497 (79%), Gaps = 4/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 647332 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 647273 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 647272 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 647213 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| |||||| || Sbjct 647212 TTGAAAGAGAGGGGTGCCCTC--GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTAAG 647155 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 647154 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 647095 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || || | ||| || || || | ||| ||||||| || |||||||||| | ||| Sbjct 647094 CACTATGA-GTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGTAGAGGAT 647036 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| | ||||||||||||||| |||||| |||||||||||||||||| | || Sbjct 647035 GAGGCCAAGTTATCATGCCCCTTATGCCTTGGGCGACACACGTGCTACAATGGGCGGGAC 646976 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| |||| ||||||| ||| || ||| ||| || |||||||||||||| Sbjct 646975 AAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTG 646916 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGCTA 479 || |||||||||| || ||||||| |||||||||||||||||| | |||| ||| | Sbjct 646915 CAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGTCGGTCAGCCATACGG 646856 Query 480 CGGTGAATACGTTCCCG 496 || |||| ||||| || Sbjct 646855 TGGCGAATCCGTTCTCG 646839 Score = 132 bits (146), Expect = 1e-28 Identities = 117/145 (81%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 158 AGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGA 217 ||||| |||||||||||||||||||||||| || || |||||| ||||||| |||||||| Sbjct 10765300 AGGTGGTGCATGGTTGTCGTCAGCTCGTGTTGTAAGGTGTTGGTTTAAGTCTCGCAACGA 10765359 Query 218 GCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTG 277 ||||||| || | | ||||||||||| | | |||| || || || | ||| ||||||| Sbjct 10765360 GCGCAACACTCATGTTTAGTTGCCATTA-TGAGTTTGGAACCCTGAACAGACCGCCGGTG 10765418 Query 278 ACAAACCGGAGGAAGGTGGGGACGA 302 || | ||||||||| | ||| || Sbjct 10765419 TTAAGCTGGAGGAAGGAGAGGATGA 10765443 Score = 82.4 bits (90), Expect = 2e-13 Identities = 90/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 84 AAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCCCCTTCG 143 ||||||||||||| |||||||| | || ||||| || | ||||| | |||| Sbjct 27460492 AAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCCTC-- 27460435 Query 144 GGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGT 202 ||| || | ||||||| ||||||| ||||||||||||||| ||| || |||||||| Sbjct 27460434 GGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGT 27460376 >seq7 Length=28646061 Score = 361 bits (400), Expect = 2e-97 Identities = 333/419 (79%), Gaps = 3/419 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 16307928 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 16307869 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 16307868 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 16307809 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 16307808 TTGAAAGAGAGGGGTGCCCT--CGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 16307751 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| ||| || |||||||||||||| |||||||||||||||||| | |||||||| Sbjct 16307750 CTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGC 16307691 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 || | | |||| || || || | ||| ||||||| || ||||||||||| | ||| Sbjct 16307690 CA-CTATGAGTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGAT 16307632 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 || | ||| ||||||||||||||||| ||||| |||||||||||||||||| | || Sbjct 16307631 GAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGAC 16307572 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATT 419 |||||| |||| ||||||| ||| || ||| ||| || ||||||||||||| Sbjct 16307571 AAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATT 16307513 Score = 192 bits (212), Expect = 2e-46 Identities = 187/237 (79%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 25372666 GACTGCCAGTGAGATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 25372607 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCA 385 ||||| |||||||||||||||||| |||| |||| ||| ||| | | | ||| Sbjct 25372606 GGCTGGGCCACACACGTGCTACAATGG-CAATGACAATGGGAAGCAAGGCTGTAAGGCGG 25372548 Query 386 AGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAG 445 ||| ||| || |||| | ||||||||||||||| ||||||||||| | |||||| Sbjct 25372547 AGCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAG 25372489 Query 446 CTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 || ||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 25372488 TTGAAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 25372432 Score = 167 bits (184), Expect = 7e-39 Identities = 178/234 (76%), Gaps = 17/234 (7%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 25372999 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 25372940 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| | |||||||||| ||||||| | ||| Sbjct 25372939 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 25372889 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 | | | | | ||| ||| || || || | ||||||| ||||||| || Sbjct 25372888 -ACAACAAAACCTGTCCTTAACGGGATGGTACTGACTTTCATACAGGTGCTGCATGGCTG 25372830 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||| ||| |||||| |||||||| |||||| Sbjct 25372829 TCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCT 25372776 >seq4 Length=20076173 Score = 224 bits (248), Expect = 3e-56 Identities = 186/225 (83%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 18 AACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGC 77 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 20045753 AACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGC 20045694 Query 78 AACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGTTTCC 137 || |||||| ||||||||| |||||||| | || ||||| || | ||||| | | Sbjct 20045693 AAAGCGAAGTACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGC 20045634 Query 138 CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGT 197 ||| ||| || | ||||||| ||| ||| ||||||||||||||| ||| || ||| Sbjct 20045633 CCT--CGGGAACGCGGACACAGGTGGTGC-TGGCTGTCGTCAGCTCGTGCCGTAAGGTGT 20045577 Query 198 TGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA 242 ||||||||||| |||||||||||||||||| | |||||||||| Sbjct 20045576 TGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCA 20045532 >seq9 Length=29411429 Score = 192 bits (212), Expect = 2e-46 Identities = 174/218 (80%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 280 AAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACAC 339 || ||||||||||||| ||| || | ||| ||||||||||||||||| ||||| |||| Sbjct 18152011 AAGCCGGAGGAAGGTGAGGATGAGGCCAAGTCATCATGCCCCTTATGCCCTGGGCGACAC 18151952 Query 340 ACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAA 399 |||||||||||||| | |||||||| |||| ||| ||| ||| || ||| || Sbjct 18151951 ACGTGCTACAATGGGCGGGACAAAGGGTCGCGATCTCGCAAGGGTGAGCTAACTCCAAAA 18151892 Query 400 AGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGT 459 | || |||||||||||||| || |||||||||| || ||||||| |||||||||||| Sbjct 18151891 ACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCAGGAATCGCTAGT 18151832 Query 460 AATCGTAGATCAG-CATGCTACGGTGAATACGTTCCCG 496 ||||| || |||| ||| | |||||||| |||||||| Sbjct 18151831 AATCGCAGGTCAGCCATACGGCGGTGAATCCGTTCCCG 18151794 Score = 138 bits (152), Expect = 3e-30 Identities = 168/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 || |||| |||| | || ||||||||||||||| ||| |||| || |||| | |||||| Sbjct 10805039 GATTGCCAGTGAGATACTGGAGGAAGGTGGGGATGACATCAAGTCCGCATGGCACTTATG 10805098 Query 327 ATTTGGGCTACACACGTGCTACA-ATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTC 384 ||||| |||||||||| ||| |||| |||| |||| ||| ||| | | | ||| Sbjct 10805099 GGCTGGGCCACACACGTGCGACATATGG-CAATGACAATGGGAAGCAAGGCTGTAAGGCA 10805157 Query 385 AAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAA 444 ||||||| || |||| | ||||||||| ||| | | ||||||||| | ||||| Sbjct 10805158 GAGCAAAT-CCGGAAAGATTGCCTCAGTTCGAATTATTCTATGCAACTCGGGAACATGAA 10805216 Query 445 GCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATA 488 | || ||| ||||||||||| ||||| ||||| |||||||| Sbjct 10805217 GTTGAAATTGCTAGTAATCGCGGATCAACATGCCGTGGTGAATA 10805260 Score = 91.5 bits (100), Expect = 4e-16 Identities = 91/117 (78%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAA----GGAATTGACGGGGACCCGCACAAGCGGTGGA 56 |||| |||||| ||||||||||| ||| |||| |||| ||| |||| || ||||| Sbjct 20796664 TACGTTCGCAAGAATGAAACTCAAATTAAGGATTTGAAGGGGGCCCACACATGCAGTGGA 20796605 Query 57 GCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG--ACATCCTC 111 | ||||||||||||| || |||| | ||||||||||||| |||| ||||| || Sbjct 20796604 GAATGTGGTTTAATTTGATGCAAAGATGAGAACCTTACCAAGACTTGGTACATCATC 20796548 >seq8 Length=28014461 Score = 192 bits (212), Expect = 2e-46 Identities = 187/237 (79%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 12548358 GACTGCCAGTGAGATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 12548299 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCA 385 ||||| |||||||||||||||||| |||| |||| ||| ||| | | | ||| Sbjct 12548298 GGCTGGGCCACACACGTGCTACAATGG-CAATGACAATGGGAAGCAAGGCTGTAAGGCGG 12548240 Query 386 AGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAG 445 ||| ||| || |||| | ||||||||||||||| ||||||||||| | |||||| Sbjct 12548239 AGCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAG 12548181 Query 446 CTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 || ||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 12548180 TTGAAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 12548124 Score = 167 bits (184), Expect = 7e-39 Identities = 178/234 (76%), Gaps = 17/234 (7%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| ||||||||||||||||||||||| || |||||||||||||||||| Sbjct 12548691 TACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 12548632 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| | |||||||||| ||||||| | ||| Sbjct 12548631 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 12548581 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 | | | | | ||| ||| || || || | ||||||| ||||||| || Sbjct 12548580 -ACAACAAAACCTGTCCTTAACGGGATGGTACTGACTTTCATACAGGTGCTGCATGGCTG 12548522 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||| ||| |||||| |||||||| |||||| Sbjct 12548521 TCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCT 12548468 >seq6 Length=36134596 Score = 192 bits (212), Expect = 2e-46 Identities = 187/237 (79%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 23004438 GACTGCCAGTGAGATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 23004497 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCA 385 ||||| |||||||||||||||||| |||| |||| ||| ||| | | | ||| Sbjct 23004498 GGCTGGGCCACACACGTGCTACAATGG-CAATGACAATGGGAAGCAAGGCTGTAAGGCGG 23004556 Query 386 AGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAG 445 ||| ||| || |||| | ||||||||||||||| ||||||||||| | |||||| Sbjct 23004557 AGCGAAT-CCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAG 23004615 Query 446 CTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 || ||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 23004616 TTGAAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 23004672 Score = 174 bits (192), Expect = 5e-41 Identities = 183/237 (77%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | || ||||||||||||||| |||||||| || |||| |||||||| Sbjct 23005294 GACTGCCAGTGAGATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 23005353 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCA 385 ||||| |||||||||||||||||| |||| |||| ||| ||| | | | || Sbjct 23005354 GGCTGGGCCACACACGTGCTACAATGG-CAATGACAATGGGAAGCAAGGCTGTAAGACGG 23005412 Query 386 AGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAG 445 || ||| || |||| | || |||| ||||||| ||||||||||| | |||||| Sbjct 23005413 GGCGAAT-CCGGAAAGATTGCCTTAGTTAGGATTGTTCTCTGCAACTCGGGAACATGAAG 23005471 Query 446 CTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 || ||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 23005472 TTGAAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 23005528 Score = 158 bits (174), Expect = 4e-36 Identities = 176/234 (75%), Gaps = 17/234 (7%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||| ||| || |||||||||||||||||| Sbjct 23004105 TACGGTCGCAAGACCGAAACTCAAAGGAATTGATAGGGGCCTGCACAAGCGGTGGAGCAT 23004164 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| | |||||||||| ||||||| | ||| Sbjct 23004165 GTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACA---TATGA------ 23004215 Query 121 TAGAGATAGAGGTTTCCCCTTCGG---GGGACAGAGT----GACAGGTGATGCATGGTTG 173 | | | | | ||| ||| || || || | ||||||| ||||||| || Sbjct 23004216 -ACAACAAAACCTGTCCTTAACGGGATGGTACTGACTTTCATACAGGTGCTGCATGGCTG 23004274 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||| ||| |||||| |||||||| |||||| Sbjct 23004275 TCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCT 23004328 Score = 95.1 bits (104), Expect = 4e-17 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| ||| Sbjct 23005113 ACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAAC 23005172 Query 216 GAGCGCAACCCT 227 ||||| |||||| Sbjct 23005173 GAGCGAAACCCT 23005184 >seq12 Length=20407407 Score = 185 bits (204), Expect = 3e-44 Identities = 153/186 (82%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 19704101 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 19704160 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||| |||||||||||||||| |||||||| | || |||| Sbjct 19704161 GTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTC 19704220 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 | || | ||||| | |||| ||| || | ||||||| ||||||| ||||||||| Sbjct 19704221 TTGAAAGAGAGGGGTGCCCT--CGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG 19704278 Query 181 CTCGTG 186 |||||| Sbjct 19704279 CTCGTG 19704284 >seq11 Length=26703665 Score = 111 bits (122), Expect = 5e-22 Identities = 132/175 (75%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 289 GAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTAC 348 ||||||||||| |||||||| || |||| |||||||| ||||| ||||||||||||| Sbjct 16459235 GAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTAC 16459176 Query 349 AATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC 407 ||||| |||| |||| ||| ||| | | | ||| ||||||| || |||| | | Sbjct 16459175 AATGG-CAATGACAATGGGAAGCAAGGCTGTAAGGCGGAGCAAAT-CCGGAAAGATTGCC 16459118 Query 408 TCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAAT 462 ||| || ||||||| |||||||||| | |||||| || ||||| ||||| Sbjct 16459117 TCAATTTGGATTGTTCTCTGCAACTCAGGAACATGAAGTTGAAATCGAACGTAAT 16459063 >seq10 Length=24717764 Score = 82.4 bits (90), Expect = 2e-13 Identities = 101/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 359 ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGAT 418 ||||||| |||| ||||| | ||| || ||| ||| || ||| |||||||| Sbjct 17229479 ACAAAGGATTGCGATCTCGCGAAGGTGAGCTAACTCCAAAAATAAGTCCTCGGTTCGGAT 17229538 Query 419 TGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATGC 477 ||||| |||||||| | ||||||| |||||||||||||||| | | || ||| | Sbjct 17229539 TGTAGGTTGCAACTCATTTGCATGAAGCAGGAATCGCTAGTAATCACCGGTTAGCCATAC 17229598 Query 478 TACGGTGAATACGTTCC 494 ||||||||| |||||| Sbjct 17229599 GACGGTGAATCCGTTCC 17229615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503999819520