Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq10 73.4 5e-11 >seq10 Length=25992119 Score = 73.4 bits (80), Expect = 5e-11 Identities = 132/187 (71%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| || ||||||||||| | | ||| Sbjct 8074589 CCAACACAATAGGACCGGAA-TCCTATGATGTTATCCCGTGCTAATGTATCCAGAGCGAT 8074647 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCAC-ACCA 130 || |||||||| ||||||||||| |||| |||| || | || | | | | ||| Sbjct 8074648 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGTGCCGGAGGCACGACCCGGCCA 8074707 Query 131 ATGAAGGCATACGGGCTCA--CCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAG 188 | ||||| || | || || | || | |||| || ||| | || ||||||||||| Sbjct 8074708 GTTAAGGC-TAGGAGCGCATCGCCAGCAGAAGGGTTGAGTAGGTCGGTGCTCGCCGTGAG 8074766 Query 189 GCGGACC 195 ||||||| Sbjct 8074767 GCGGACC 8074773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199930808