Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq6 80.6 4e-13 >seq6 Length=34615992 Score = 80.6 bits (88), Expect = 4e-13 Identities = 99/134 (74%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||||| | ||||| || ||| || ||||||||||| || || || || Sbjct 1846880 CATGGAATGCTTCTT-GAGGAATATCAACGGACCCTACTCGCTTCATTCGCTTCTTCCCT 1846938 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 | ||||||||||| |||| ||| || || | | ||||| || ||||| ||||| Sbjct 1846939 TCTTTTTGCTTCTCTAGCAACTTCTTTTTGCGAGTAATATCACCACCATAGCACTTGGCA 1846998 Query 217 AGTACGTTCTTTCT 230 || || |||||||| Sbjct 1846999 AGAACATTCTTTCT 1847012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838399899392