Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1529 86.0 3e-15 >seq1529 Length=138 Score = 86.0 bits (94), Expect = 3e-15 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| | |||||| || Sbjct 89 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCC 30 Query 61 GATCCCTAGTCGGCATAGTTTACGGTT 87 ||||||| |||||||| ||||| |||| Sbjct 29 GATCCCTGGTCGGCATCGTTTATGGTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278390035020