Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 2e-12 >seq5 Length=26652778 Score = 89.7 bits (98), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 120191 GTGCACCGGGACATGAAGTCGCTCAACCTTCTCCTGGACAACAAGTGGAACGTCAAGGTC 120250 |||||||||||||| |||||| |||| | || |||||||| | |||||| ||||||| Sbjct 18604325 GTGCACCGGGACATCAAGTCGAGCAACATACTGCTGGACAAGAGATGGAACCCCAAGGTC 18604266 Query 120251 TCTGACTTTGGCCTCACCAAGTTC 120274 || |||||||||||| ||||| || Sbjct 18604265 TCGGACTTTGGCCTCGCCAAGCTC 18604242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084634731112764