Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq8 592 2e-164 seq2 538 4e-148 seq10 426 2e-114 seq12 145 8e-30 seq4 140 4e-28 seq6 118 1e-21 >seq8 Length=25958679 Score = 592 bits (656), Expect = 2e-164 Identities = 725/989 (73%), Gaps = 23/989 (2%) Strand=Plus/Plus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCC 159922 || ||||| || | | | | |||||| | || || ||||||||||| |||| | Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTTTGTATTTATTATCGCCTTCATCACTGC---C 20127928 Query 159923 CCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAAC 159982 ||| | ||||| | || |||||| | | ||||| ||||| Sbjct 20127929 CCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAAT 20127972 Query 159983 ATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATT 160042 || ||||||||||| || |||| |||| || || || | ||||| || || ||| Sbjct 20127973 ATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATT 20128032 Query 160043 TGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGTC 160102 |||||||| ||||| | || |||||| | || || || ||||||| | || | || Sbjct 20128033 TGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 20128092 Query 160103 TTCCACTTCCTGATCGGCAT--CTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 160160 | |||||| | | || | || || | |||||||||||||||||||||| || || Sbjct 20128093 CTACACTTCTTACTTGGTGTAGCT-TGTC-ATATGGGTCGTGAGTGGGAACTGAGTTTCC 20128150 Query 160161 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTG 160220 |||| ||||||||||| ||||| ||||||||| || ||||| || || |||||| ||| Sbjct 20128151 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACTG 20128210 Query 160221 CTGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 160280 |||| ||| | ||||| | ||||| || |||||| |||| ||||||| | || | Sbjct 20128211 CTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 20128270 Query 160281 TCTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATC 160340 | ||||||||||| |||| |||| |||||||||| ||||| || || ||||||||||||| Sbjct 20128271 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 20128330 Query 160341 CGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATG 160400 | || |||||| | ||||| ||||| |||||||| || || || ||| ||||||||||| Sbjct 20128331 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 20128390 Query 160401 GATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATG 160460 | || |||| || |||||| | |||| || || || |||| || || || | | Sbjct 20128391 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 20128450 Query 160461 GTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCG 160520 |||||| || |||||||||||||||||||| || || || || || ||||| || || | Sbjct 20128451 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 20128510 Query 160521 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCG 160580 | || || |||||||||||||| ||||||||||| || || | ||||||||| | | Sbjct 20128511 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTTGG 20128570 Query 160581 CTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCA 160640 ||||||||||| || || || ||||||||||| | ||| || ||| ||||| |||| Sbjct 20128571 TAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 20128630 Query 160641 ATCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACA 160700 |||| || || ||||| |||||||| || | | || | |||||| | ||| | || | Sbjct 20128631 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 20128690 Query 160701 CTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACG 160760 ||||||| || | | ||||| ||| ||| || |||||||| |||||||| ||||| | Sbjct 20128691 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 20128750 Query 160761 CTCACAACTTCCCTCTCGACCTTGCTGCT 160789 |||||||||||||||| ||||| |||||| Sbjct 20128751 CTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq2 Length=33962743 Score = 538 bits (596), Expect = 4e-148 Identities = 731/1012 (72%), Gaps = 7/1012 (1%) Strand=Plus/Minus Query 161527 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 161586 ||||||||| | | | || ||||| |||||||| || |||||||| || | |||||| Sbjct 13366825 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 13366766 Query 161587 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGG 161646 || ||||||| | ||| | || |||||| |||| || || ||||| | || ||| Sbjct 13366765 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 13366706 Query 161647 TATACCCATGGACTCGCTAGTTCCTATCTTGAGGGT-GCAAATTTTCTTA-CAGCGGCAG 161704 |||||||||||| | || ||||||||| | || ||| |||| ||||||| | | |||| Sbjct 13366705 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGTAGCAG 13366648 Query 161705 TTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGGTCCTGAGGCTC 161764 || | | || || | | | | || ||| | | || || ||||| || || || | Sbjct 13366647 TTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 13366588 Query 161765 AAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 161824 |||||||||| | ||| ||| | || || || |||| |||||| || ||||| | Sbjct 13366587 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCATG 13366528 Query 161825 GGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGT 161883 ||||||| || || || || |||||| | ||||| |||||||||||||| ||| || | Sbjct 13366527 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 13366468 Query 161884 ATCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTT 161943 | | ||||| ||||| ||| | |||||||| || |||||||||||||| ||| || Sbjct 13366467 -TGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATTC 13366409 Query 161944 CTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCT 162003 | || ||||| ||||| || || |||||||| ||||| ||||| || || || Sbjct 13366408 CCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 13366349 Query 162004 ATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCAC 162063 || || | ||| | || ||| | ||||| || || ||||||||| | || || || || Sbjct 13366348 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 13366289 Query 162064 ATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACT 162123 |||||||| || || || | || || | ||| |||| | |||||||| || | || Sbjct 13366288 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 13366229 Query 162124 GTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCT 162183 || |||||||| || | | || ||||| ||||||| || ||||| || | Sbjct 13366228 GTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCCA 13366169 Query 162184 ACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTC 162243 || |||| || || ||||| || ||||| || || || || || ||||| || ||||| Sbjct 13366168 ACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 13366109 Query 162244 GGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATG 162303 ||| |||||||| ||||| |||||||| |||||||||||||| || || || |||| Sbjct 13366108 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 13366049 Query 162304 GGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGAC 162363 ||| | |||| ||| |||| || | | || || ||||| || || | ||| || ||| Sbjct 13366048 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGAC 13365989 Query 162364 TTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAG 162423 || || || ||||| || ||||||||||| |||||||||||||| || ||||||||||| Sbjct 13365988 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 13365929 Query 162424 AATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAG 162483 ||||| || || || | ||| ||||||| ||| ||||| | ||||| || ||||| Sbjct 13365928 AATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 13365869 Query 162484 AACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || || ||||||||||||| |||| || | || ||||| || | ||||| Sbjct 13365868 AATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT-TTAATGG 13365818 Score = 178 bits (196), Expect = 1e-39 Identities = 233/323 (72%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 162053 ATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGCTCTCTGCTATTC 162112 |||| || || |||||||| || || || | || || | ||| |||| | ||||||| Sbjct 18364939 ATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 18364998 Query 162113 ACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAAATACTTTCAAGG 162172 | || | || || |||||||| || | | || ||||| |||||||| ||| | Sbjct 18364999 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCG 18365058 Query 162173 CTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGGT 162232 ||||| || | || |||| || || ||||| || ||||| || || || || || |||| Sbjct 18365059 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 18365118 Query 162233 CACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCG 162292 | || ||||| ||| |||||||| ||||| |||||||| |||||||||||||| || | Sbjct 18365119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 18365178 Query 162293 TTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTC 162352 | || |||| ||| | |||| ||| |||| || | | || || ||||| || || | Sbjct 18365179 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 18365238 Query 162353 GTGCTTACGACTTTGTATCTCAG 162375 |||| || ||||| || || ||| Sbjct 18365239 GTGCCTATGACTTCGTTTCCCAG 18365261 Score = 147 bits (162), Expect = 2e-30 Identities = 140/178 (79%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 162358 TACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTAC 162417 || ||||| || || ||||| || ||||||||||| |||||||||||||| || |||||| Sbjct 13367198 TATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTAC 13367257 Query 162418 ACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCG 162477 ||||| ||||| || || || || ||| ||||||| ||| ||||| | ||||| || Sbjct 13367258 ACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCT 13367317 Query 162478 CATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 ||||| || || ||||||||||||| ||||| || | || ||||| || | ||||| Sbjct 13367318 CATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT-TTAATGG 13367374 Score = 96.9 bits (106), Expect = 4e-15 Identities = 123/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 160601 ATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTC 160660 || ||||||||||| | ||| || || ||||| |||||||| ||||| ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 160661 AACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAAC 160720 ||||| || | | || | |||||| | ||| | | |||||||| || | | ||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 160721 CGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAAC 160768 || || ||| | |||||||| |||||||| ||||| |||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 426 bits (472), Expect = 2e-114 Identities = 456/604 (75%), Gaps = 10/604 (2%) Strand=Plus/Plus Query 160186 TGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGG 160245 ||||||||| || ||||| || || |||||| ||||||| ||| | | ||||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 160246 TCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCT 160305 ||| || ||||| |||| ||||||| | || || ||||||||||| |||| |||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 160306 TGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGG 160365 ||||||||| ||||| || || ||||||||||||| || |||||| | ||||| ||||| Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 160366 GGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGT 160425 |||||||| || || || || |||||||||||| || |||| || |||||| | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 160426 CAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGA 160485 | | || || || |||| || || || | ||||||| || |||||||||||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 160486 GACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATC 160545 |||||| || || || || || ||||| || || || || || |||||||||||||| Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 160546 CTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTG 160605 ||||||||||| || ||| | ||||||||| | |||||||||||||| || || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 160606 GTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCA 160665 ||||| ||| | ||| || ||| ||||| |||||||| || || ||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 160666 GTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGC 160725 | | | || | |||| | || |||||||| || | | ||||| || Sbjct 18976131 ATATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTGC 18976180 Query 160726 TGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGC 160785 | ||| || |||||||| |||||||| ||||| ||||||||||||||||| ||||| || Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 18976240 Query 160786 TGCT 160789 |||| Sbjct 18976241 TGCT 18976244 Score = 178 bits (196), Expect = 1e-39 Identities = 164/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 160235 TACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTT 160294 ||||| | ||||| || |||||| |||| ||||||| | || || ||||||||||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 160295 AACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTC 160354 |||| |||| |||||||||| ||||| || || |||||||||||||| || |||||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 160355 GGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACT 160414 ||||| ||||| |||||||| || || || ||| |||||||||||| || |||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 160415 TCTAGTCTCGTCAGAGAGACGACAGAAA 160442 |||||| | |||| || || || |||| Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAA 9553449 >seq12 Length=23561512 Score = 145 bits (160), Expect = 8e-30 Identities = 206/287 (72%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 |||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 |||||||| || | ||| | |||||| |||| || || |||||||||||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 || | || || ||||| || ||||| | || |||||| | | ||||| ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 || ||||||||| | || |||| |||| | || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTT 160088 ||||||||| ||||| | || |||||| | || || || ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 160583 GCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAAT 160642 ||||||||||| || || || ||||||||||| | ||| || ||| ||||| |||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 160643 CTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACT 160702 || || || ||||| |||||| | || | | || | |||||| | ||| | || ||| Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 160703 TGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCT 160762 ||||| || | | || || ||| ||| || |||| ||| || ||||| ||||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 160763 CACAACTTCCCTCTCGACCTTGCTGCT 160789 |||||||||||||| ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq4 Length=30521686 Score = 140 bits (154), Expect = 4e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 161788 CAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTC 161847 ||| | || || || |||| |||||| || ||||| |||||||| || || || || ||| Sbjct 7261230 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 7261289 Query 161848 ATGCTTCGTCAGTTTGAACTTGCTC-GTCTTATCGGTATCCGTCCTTACAATGCTATTGC 161906 ||| | ||||| ||||||||||||| |||| || | | || ||||| ||||| ||| | Sbjct 7261290 ATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTC 7261348 Query 161907 TTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTC 161966 |||||||| || || ||||||||||| ||| || || || ||||| ||||| || || Sbjct 7261349 ATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 7261408 Query 161967 GTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTAT 162005 |||||||| ||||| ||||| || || || || Sbjct 7261409 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq6 Length=27870862 Score = 118 bits (130), Expect = 1e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 160510 TGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCA 160569 ||| || || || || || |||||||||||||| ||||||||||| || ||| | || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 160570 CTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTAC 160629 ||||||| | |||||||||||||| || || || ||||||||||| | ||| || ||| Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 160630 CATGGCATTCAATCTCAA 160647 ||||| |||||||| || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 162337 CTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGAT 162396 || ||||| || | |||| || ||||| || | || || | |||||||| | || Sbjct 6536584 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAAAACAT 6536525 Query 162397 CCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGG 162456 ||||||||||| || |||| |||||| ||||| || || || || || ||||||| ||| Sbjct 6536524 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 6536465 Query 162457 TTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512 || | | |||| || ||| || || ||||||||||||| ||||| || Sbjct 6536464 ATGATAGCTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCTACC 6536409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551349685580400