Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq8 619 1e-172 seq2 499 3e-136 seq10 439 3e-118 seq12 179 4e-40 seq4 174 2e-38 seq6 96.9 4e-15 >seq8 Length=25958679 Score = 619 bits (686), Expect = 1e-172 Identities = 729/988 (74%), Gaps = 21/988 (2%) Strand=Plus/Plus Query 160572 TTCTGCGAGTGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTG 160631 |||||| | ||| ||||| || | || ||||||||| |||| ||||||||||| || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 160632 ATGATCCCAACTCTGTTGGCAGCAACCGTCTGCTTTATTACTGCGTTCGTTGCTGCTCCC 160691 || ||||| || | | | | ||||| | ||||||| || ||| | |||| || Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTTTGTATTTATTATCGCCTTCATCACTGCCCCT 20127931 Query 160692 CCCGTGGACATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAAC 160751 | |||| ||| ||| |||||| | | || |||||||| Sbjct 20127932 CTCGTGAGCAT-------------------GTTTCTGGTTTTTTACTTTACGGAAACAAT 20127972 Query 160752 ATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCATT 160811 || ||||||||||| || ||||| |||| || || || | ||||| ||||| ||| Sbjct 20127973 ATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATT 20128032 Query 160812 TGGGAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTA 160871 ||||||||||||||| ||||||| ||| | |||||||| |||||||| | || | || Sbjct 20128033 TGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 20128092 Query 160872 TTTCACTTCCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCGC 160931 | |||||| | | || | || | |||||||| ||||||||||| | ||| Sbjct 20128093 CTACACTTCTTACTTGGTGTAGCTTGTCATATGGGTCGTGAGTGGGAACTGAGTTTCCGT 20128152 Query 160932 CTCGGCATGCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGC 160990 || || ||||| || ||||| ||| ||||||||||| || |||||||| ||||| | ||| Sbjct 20128153 CTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACTGC 20128211 Query 160991 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTAT 161050 || ||| | || ||| | |||||||| |||||||||||||||||| | || || Sbjct 20128212 TGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 20128271 Query 161051 CTCTGGTACCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCC 161110 |||||||| |||||||| ||| |||| ||||||||||| || |||||||| ||||| || Sbjct 20128272 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 20128331 Query 161111 CTTCCACATGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGG 161170 || |||||||| ||||| |||||||| ||||| ||||| || ||| || |||||||| Sbjct 20128332 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 20128391 Query 161171 TTCACTGGTTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATGG 161230 ||| |||| || ||| || | | ||||||||||| ||||| || || | || Sbjct 20128392 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 20128451 Query 161231 TTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCGG 161290 ||||| ||||||||||| |||||||| || || || || || ||||||||||| || || Sbjct 20128452 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 20128511 Query 161291 TCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGC 161350 || | ||||||||||| ||| || |||||||| |||||||| ||||||||| | | Sbjct 20128512 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTTGGT 20128571 Query 161351 AGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAA 161410 ||| |||||||| || || || ||||||||||| | ||| | || ||||| ||||| Sbjct 20128572 AGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 20128631 Query 161411 CCTGAACGGATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACAC 161470 || ||||||||||| |||||||| || | | ||| | || || || | || || Sbjct 20128632 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 20128691 Query 161471 CTGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGC 161530 |||||||| | | || |||||||| ||||||||||||||||||||||| |||||||| Sbjct 20128692 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 20128751 Query 161531 TCACAACTTCCCTCTGGATCTCGCTGCT 161558 ||||||||||||||| || || |||||| Sbjct 20128752 TCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq2 Length=33962743 Score = 499 bits (552), Expect = 3e-136 Identities = 723/1014 (71%), Gaps = 14/1014 (1%) Strand=Plus/Minus Query 163897 TGGACGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTT 163956 ||||||||||| | | | || || ||||| ||||| || |||||||| || | |||| Sbjct 13366827 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 13366768 Query 163957 TTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTT 164016 |||| ||||||| | || | || || ||| |||| || ||||| ||||| || || Sbjct 13366767 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 13366708 Query 164017 GGTACACCCACGGTCTCGCGTCTAGTTACC--TTG--AGGGTGCTAATTTCCTTACAGCG 164072 |||| ||||| || | ||| |||| | ||| ||| ||| |||||| | || | Sbjct 13366707 GGTATACCCATGGATTGGCG---AGTTCCTATTTGGAAGGTTGC-AATTTCTTAACCGTA 13366652 Query 164073 GCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAG 164132 || || || | ||||| || | | | || ||| | | ||||| ||||| || || Sbjct 13366651 GCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAA 13366592 Query 164133 TCTCAGGGGGACTTCATTAGGTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTC 164192 | || ||||| || | | | ||||| ||| | || || || ||| ||||||| || || Sbjct 13366591 GCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTC 13366532 Query 164193 CACGGATCTTTCGCTCTGATCGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTA 164252 || || |||| || || || ||||||||| | || || |||||| |||| || ||| Sbjct 13366531 CATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTT 13366472 Query 164253 GGTATCCGTCCGTACAATGCTATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTT 164312 | | || || ||||| ||| | |||||||| || |||||||| ||||| ||| Sbjct 13366471 CAATTGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTA 13366412 Query 164313 TTCCTTATGTACCCTCTCGGGCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCG 164372 |||| || || || || |||||||| ||||||||||||| || ||||| || || Sbjct 13366411 TTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCA 13366352 Query 164373 GCGATCTTCAGATTCCTCTTGTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTC 164432 ||||| || ||||| || | ||| ||||||| || ||||| ||||| | ||||| || Sbjct 13366351 GCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTT 13366292 Query 164433 CATATGATGGGTGTTGCAGGCATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCT 164492 ||||||||||| ||||| || | | || | ||||| || || ||||||||||| || Sbjct 13366291 CATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCA 13366232 Query 164493 ACCGTAGAGAATACTTTGTTTGAAGATGGTGAACAATCAAATAC-TTTCAAGGCA--TTC 164549 ||||| || || ||| | ||||| || ||||| ||||||| |||| ||| || Sbjct 13366231 ACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTC---GCACTTTT 13366175 Query 164550 GAGCCTACTCAAGAGGAAGAGACTTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAG 164609 | || ||||||| ||||| ||||| || |||||||| || || ||||| ||||| || Sbjct 13366174 AACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAA 13366115 Query 164610 ATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCT 164669 || |||||| ||||||| |||||| |||||||| || ||||||||||| ||||| || Sbjct 13366114 ATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCG 13366055 Query 164670 GTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCT 164729 |||| || | |||| ||| ||||||| | |||| || || || || || | ||| Sbjct 13366054 GTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCC 13365995 Query 164730 TATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTAT 164789 ||||| || || || ||||| || | ||||| || ||||||||||||||||| ||||| Sbjct 13365994 TATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTAC 13365935 Query 164790 ACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCA 164849 || || || || || | || | || | ||||| |||||||| | || ||||| Sbjct 13365934 ACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCT 13365875 Query 164850 CACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 || ||| || |||| || ||||| |||| || | || ||||| || ||| Sbjct 13365874 CATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCTTTAA 13365821 Score = 205 bits (226), Expect = 1e-47 Identities = 238/321 (74%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 164427 CCCTTCCATATGATGGGTGTTGCAGGCATCCTTGGTGGTGCTCTTCTCTGTGCTATTCAT 164486 || || ||||||||||| ||||| || | | || | ||||| || || ||||||||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 164487 GGTGCTACCGTAGAGAATACTTTGTTTGAAGATGGTGAACAATCAAATACTTTCAAGGCA 164546 || || ||||| || || ||| | ||||| || ||||| ||||||| ||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 164547 TTCGAGCCTACTCAAGAGGAAGAGACTTACTCGATGGTCACTGCCAACCGCTTCTGGTCT 164606 || | || ||||||| ||||| ||||| || |||||||| || || ||||| ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 164607 CAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTT 164666 || || |||||| ||||||| |||||| |||||||| || ||||||||||| ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 164667 CCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAATCTTCGT 164726 || |||| || | |||| ||| ||||||| | |||| || || || || || ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 164727 GCTTATGATTTTGTGTCTCAG 164747 || ||||| || || || ||| Sbjct 18365241 GCCTATGACTTCGTTTCCCAG 18365261 Score = 93.3 bits (102), Expect = 5e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 164730 TATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTAT 164789 ||||| || || || ||||| || | ||||| || ||||||||||||||||| ||||| Sbjct 13367198 TATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTAC 13367257 Query 164790 ACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCA 164849 || || || || || | || || || | ||||| |||||||| | || ||||| Sbjct 13367258 ACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCT 13367317 Query 164850 CACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 || ||| || |||| || ||||| ||||| || | || ||||| || ||| Sbjct 13367318 CATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 13367371 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 161370 ATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTC 161429 || ||||||||||| | ||| | || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 161430 AACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAAT 161489 ||||| || | | ||| | || || || | | || |||||||| | | || Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 161490 CGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAAC 161537 ||||| || |||| |||||||||||||||||| |||||||||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 439 bits (486), Expect = 3e-118 Identities = 460/603 (76%), Gaps = 10/603 (2%) Strand=Plus/Plus Query 160956 GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGT 161015 ||||||||||| || |||||||| ||||| | ||| || ||| | | || ||| | ||| Sbjct 18975652 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGT 18975711 Query 161016 CAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTT 161075 ||||| ||||| |||||||||||| | || || |||||||| |||||||| ||| || Sbjct 18975712 CAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATT 18975771 Query 161076 GTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGT 161135 || ||||||||||| || |||||||| ||||| | || |||||||| ||||| |||||| Sbjct 18975772 GTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGGT 18975831 Query 161136 GTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTT 161195 || ||||| ||||| || || || ||||||||||| |||| || ||| || | Sbjct 18975832 GTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATC 18975891 Query 161196 CGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAG 161255 | ||||||||||| ||||| || || | ||||||| ||||||||||| |||||| Sbjct 18975892 GGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAG 18975951 Query 161256 ACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCC 161315 || || || || || || ||||||||||| || || || | ||||||||||| ||| Sbjct 18975952 ACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGT 18976011 Query 161316 TTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGG 161375 || |||||||| || || || ||||||||| | || || |||||||| || || || ||| Sbjct 18976012 TTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGG 18976071 Query 161376 TTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAG 161435 |||| ||| | ||| | || ||||| ||||| || ||||||||||| |||||||| Sbjct 18976072 TTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAA 18976131 Query 161436 TCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCT 161495 | ||| | | | | || || | || || |||||||| | | || |||||| Sbjct 18976132 T-----ATGTA-GTTGATAGCCAA----TTAATACTTGGGCTGATATCATCAACCGTGCT 18976181 Query 161496 AACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCT 161555 || ||||||||||||||||||||||| ||||||||||||||||||||||| || || ||| Sbjct 18976182 AATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 18976241 Query 161556 GCT 161558 ||| Sbjct 18976242 GCT 18976244 Score = 185 bits (204), Expect = 1e-41 Identities = 170/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 161004 TATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTC 161063 || ||| | |||||||| |||||||||||||||||| | || || |||||||| ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 161064 AACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTG 161123 ||||| ||| |||| ||||||||||| || |||||||| ||||| || || |||||||| Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 161124 GGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACT 161183 ||||| |||||||| ||||| ||||| || ||| || ||||||||||| |||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 161184 TCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTC 161218 ||| || | | ||||||||||| ||||| || Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAAACGAATC 9553442 >seq12 Length=23561512 Score = 179 bits (198), Expect = 4e-40 Identities = 214/288 (74%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 160572 TTCTGCGAGTGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTG 160631 |||||| | ||| ||||| || | || ||||||||| | || ||||| ||||| || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 160632 ATGATCCCAACTCTGTTGGCAGCAACCGTCTGC-TTTATTACTGCGTTCGTTGCTGCTCC 160690 |||||||| || | ||| | ||||| |||| ||||||| || ||| | ||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 160691 CCCCGTGGACATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAA 160750 || | || || || ||||| ||||| | ||| |||||| | | || |||||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 160751 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCAT 160810 || ||||||||| | || ||||| |||| | || || || | ||||| ||| | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 160811 TTGGGAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTA 160858 |||||||||||||||| ||||||| ||| | |||||||| |||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTA 9700601 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 161352 GCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAAC 161411 || |||||||| || || || ||||||||||| | ||| | || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 161412 CTGAACGGATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACC 161471 || ||||||||||| |||||| | || | | ||| | || || || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 161472 TGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCT 161531 |||||||| | | ||||||||||| |||||||||| |||||| ||||| |||||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 161532 CACAACTTCCCTCTGGATCTCGCTGCT 161558 |||||||||||||| || || |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq4 Length=30521686 Score = 174 bits (192), Expect = 2e-38 Identities = 218/299 (73%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 164154 TGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGATC 164213 ||||| ||| | || || || ||| ||||||| || |||| || |||| || || || Sbjct 19658517 TGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATA 19658458 Query 164214 GGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGCT 164273 ||||||||| | | || |||||| || | || ||| | || || || ||||| Sbjct 19658457 GGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAATTGCGGCCTTATAATGCA 19658398 Query 164274 ATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGGG 164333 ||| | |||||||| || || ||| | ||||| ||| ||||| || || || || ||| Sbjct 19658397 ATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGG 19658338 Query 164334 CAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTTG 164393 ||||| ||||||||||||| || ||||| || || ||||| || ||||| || | Sbjct 19658337 CAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTC 19658278 Query 164394 TTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452 ||| ||||||| || ||||| ||||| | ||||| || ||||||||||| ||||| || Sbjct 19658277 TTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 19658219 Score = 129 bits (142), Expect = 7e-25 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 164154 TGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGATC 164213 ||||| ||| | || || || ||| ||||||| || |||| || |||| || || || Sbjct 7261224 TGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATA 7261283 Query 164214 GGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGCT 164273 ||||||||| | || || |||||| |||| || ||| | || || || ||||| Sbjct 7261284 GGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCA 7261343 Query 164274 ATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGGG 164333 ||| | |||||||| || || ||||| ||||| ||| ||||| || || || || ||| Sbjct 7261344 ATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGG 7261403 Query 164334 CAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGAT 164377 ||||| ||||||||||||| || ||||| || || ||||| Sbjct 7261404 CAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 Score = 102 bits (112), Expect = 9e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 160771 TTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTG 160830 ||||| |||| || || || | ||||| ||||| |||||||||||||||||| ||| Sbjct 7243066 TTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTG 7243125 Query 160831 ATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCA 160890 |||| ||| | ||||||||||||||||| | || | || | |||||| | | || Sbjct 7243126 ATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 7243185 Query 160891 TCTTCTGCTACATGGGTCGCGAGTGGGAACT 160921 | || || |||||||| ||||||||||| Sbjct 7243186 TAGCTTGTTATATGGGTCGTGAGTGGGAACT 7243216 >seq6 Length=27870862 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 161279 TGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCA 161338 |||||| || || || | ||||||||||| ||| || |||||||| ||||| || || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 161339 CTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCAC 161398 ||||||| | || || |||||||| || || || ||||||||||| | ||| | || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 161399 CATGGCATTCAACCTGAA 161416 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559301306071200