Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq7 246 6e-63 seq5 242 7e-62 seq4454 233 4e-59 seq4 230 4e-58 seq3 224 2e-56 seq9 215 9e-54 seq432 201 2e-49 seq733 149 1e-33 seq1290 80.6 5e-13 >seq7 Length=46770411 Score = 246 bits (272), Expect = 6e-63 Identities = 204/245 (83%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 1067946 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 1067887 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 1067886 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 1067828 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 1067827 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 1067768 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct 1067767 AGACGAACAACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 1067709 Query 314 AGGGG 318 |||| Sbjct 1067708 GGGGG 1067704 Score = 242 bits (268), Expect = 7e-62 Identities = 203/245 (83%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 1035230 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 1035171 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 1035170 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 1035112 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 1035111 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 1035052 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 1035051 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 1034993 Query 314 AGGGG 318 |||| Sbjct 1034992 GGGGG 1034988 Score = 242 bits (268), Expect = 7e-62 Identities = 203/245 (83%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||| | ||| | |||| |||||||||||||||| Sbjct 4595283 TTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCATCGCTCTGAATACATTAGCATGGG 4595342 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 4595343 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 4595401 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 4595402 TAGGGACAGTCGGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 4595461 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 4595462 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 4595520 Query 314 AGGGG 318 |||| Sbjct 4595521 GGGGG 4595525 Score = 235 bits (260), Expect = 1e-59 Identities = 203/246 (83%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | ||| | |||||||||||||| Sbjct 1921785 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTTTGGATACATTAGCATGGG 1921726 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTT-TGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||| | |||||| | |||| |||||| |||||| | ||| || |||||||||| Sbjct 1921725 ATAACATCATAGGAT-TCCGGTCCTATTTCTGTTGGCCTTCGGGATCGGAGTAATGATTA 1921667 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 1921666 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGA 1921607 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 1921606 AAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 1921548 Query 313 TAGGGG 318 | |||| Sbjct 1921547 TGGGGG 1921542 Score = 228 bits (252), Expect = 1e-57 Identities = 200/245 (82%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 4651870 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 4651929 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 4651930 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 4651988 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || ||||||||||||||||||| |||||| | Sbjct 4651989 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGAATTTATGAA 4652048 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||| ||||||||||||||| |||| |||||| Sbjct 4652049 AGACGAACAACTGCGAAAGCATTTGCCAAGGTTGTTTTCATTAATCA-AGAACAAAAGTT 4652107 Query 314 AGGGG 318 |||| Sbjct 4652108 GGGGG 4652112 Score = 228 bits (252), Expect = 1e-57 Identities = 200/245 (82%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | ||||||||||||| Sbjct 4692632 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGAG 4692573 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 4692572 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 4692514 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 4692513 TAGGGACAGTCGGGGGCATTTGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 4692454 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| || ||||||||||| || |||||||||||||||||||||| ||||||||| | Sbjct 4692453 AGACGAATAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGAT 4692395 Query 314 AGGGG 318 |||| Sbjct 4692394 GGGGG 4692390 Score = 219 bits (242), Expect = 8e-55 Identities = 198/245 (81%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 2920073 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2920014 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 2920013 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 2919955 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | |||| || || ||||||||||||||| ||||||| | Sbjct 2919954 TAGGGACAGTCGGGGGCATTCATATTTCATGGTTAGAGGTGAAATTCTTTGATTTATGAA 2919895 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| |||| |||||| || |||||||||||||||||||||| |||| |||||| Sbjct 2919894 AGACGAACAACTGTGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACAAAAGTT 2919836 Query 314 AGGGG 318 |||| Sbjct 2919835 GGGGG 2919831 Score = 219 bits (242), Expect = 8e-55 Identities = 198/245 (81%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 25849942 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 25850001 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | ||||| | |||| ||||| |||||| | ||| | | || |||||| Sbjct 25850002 ATAACATGCTAGGAT-TCCGGTCCTATTATGTTGGCCTTCGGGATTGGAGCAAGGATTAA 25850060 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 25850061 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 25850120 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || ||||| |||||||||||||||| ||||||||||| Sbjct 25850121 AGACGAACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTT 25850179 Query 314 AGGGG 318 |||| Sbjct 25850180 GGGGG 25850184 Score = 86.0 bits (94), Expect = 1e-14 Identities = 104/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| |||||||||| ||| |||| ||| | |||| | |||||||||||| Sbjct 1870839 CTATTACTTTGAAGAAATTAGAGTACTCAGAGCAAGCCATCGCTCTGGATACATTAGCAT 1870898 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | ||| || | |||| ||||| |||||| | | | || ||||| || Sbjct 1870899 GGGATAACATCATA-GAATTCCGGTCCTATTGTGTTGGCCTTCGGAATCGGAGTAATAAT 1870957 Query 191 TAATAGGGATAGTCGGGG 208 || || || |||||||| Sbjct 1870958 TA--AGAGACAGTCGGGG 1870973 Score = 77.0 bits (84), Expect = 6e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 2406659 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2406718 Query 134 ATAA 137 |||| Sbjct 2406719 ATAA 2406722 >seq5 Length=59822759 Score = 242 bits (268), Expect = 7e-62 Identities = 203/245 (83%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 47011413 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 47011472 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 47011473 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 47011531 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 47011532 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 47011591 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 47011592 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 47011650 Query 314 AGGGG 318 |||| Sbjct 47011651 GGGGG 47011655 Score = 233 bits (258), Expect = 4e-59 Identities = 201/245 (82%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | ||| | |||||||||||||| Sbjct 46931010 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTTTGGATACATTAGCATGGG 46931069 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 46931070 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 46931128 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 46931129 CAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 46931188 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 46931189 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 46931247 Query 314 AGGGG 318 |||| Sbjct 46931248 GGGGG 46931252 Score = 187 bits (206), Expect = 5e-45 Identities = 182/232 (78%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| |||||| |||| |||||||| ||| || ||| | |||||||||||||| Sbjct 16769033 TTACTTTGAAGAAATTATAGTGCTCAAAGCAAGCCATTTCTCTGGATACATTAGCATGGG 16768974 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | || | ||||| |||||| || |||| || ||||| ||||| Sbjct 16768973 ATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCTTTCAGGATCGGAGTAATAATTAA 16768915 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCA-----GAGGTGAAATTCTTGGATTT 248 |||||| |||| ||| | ||||| || |||| |||||||||||||| |||| Sbjct 16768914 TAGGGACAGTCAAGGGCATTTGTATTTCATAGTCAATTAGGAGGTGAAATTCTTAAATTT 16768855 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 || ||||| ||| ||||||||| | || || |||||||||||||||||||| Sbjct 16768854 ATGAAAGACGAACAACTGCGAAATCATTTACTAAGGATGTTTTCATTAATCA 16768803 >seq4454 Length=1743 Score = 233 bits (258), Expect = 4e-59 Identities = 201/245 (82%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | ||| | |||||||||||||| Sbjct 258 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTTTGGATACATTAGCATGGG 199 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 198 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 140 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 139 CAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 80 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 79 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 21 Query 314 AGGGG 318 |||| Sbjct 20 GGGGG 16 >seq4 Length=49548238 Score = 230 bits (254), Expect = 4e-58 Identities = 202/248 (81%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| ||| | |||| | ||| |||||||| Sbjct 45119314 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATAAATTAGCAT 45119255 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 | |||| | ||||| | |||| ||||| |||||| | |||| || |||||||| Sbjct 45119254 AGGATAACATCCTAGGAT-TCCGGTCCTATTGTGTTGGCCTTCAGGATCGGAGTAATGAT 45119196 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 |||||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 45119195 TAATAGGGGCAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 45119136 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| | ||||||||| || |||||||||||||||||||||| |||||||| Sbjct 45119135 GAAAGACGAACAAGTGCGAAAGCATTTTCCAAGGATGTTTTCATTAATCA-AGAACGAAA 45119077 Query 311 GTTAGGGG 318 |||||||| Sbjct 45119076 GTTAGGGG 45119069 >seq3 Length=64463019 Score = 224 bits (248), Expect = 2e-56 Identities = 199/245 (81%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||| ||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 19327260 TTACTTTGAAGAAACTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 19327319 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | ||| ||||| |||||| | ||| || ||||||||||| Sbjct 19327320 ATAACATCATAGGAT-TCTGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 19327378 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 19327379 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 19327438 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| | ||||||||| || |||||||||||||||||||||| ||| ||||||| Sbjct 19327439 AGACGAACAATTGCGAAAGCATTTTCCAAGGATGTTTTCATTAATCA-AGAATGAAAGTT 19327497 Query 314 AGGGG 318 |||| Sbjct 19327498 GGGGG 19327502 Score = 174 bits (192), Expect = 3e-41 Identities = 160/200 (80%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 |||| ||||||||| |||| | |||||| | |||| ||||| |||||| | ||| Sbjct 19327096 ATACGTTAGCATGGGATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGAT 19327038 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 || ||||||||||||||||| ||||||||| | ||||| || ||||||||| |||| Sbjct 19327037 CGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTAAAAT 19326978 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 || ||||||||| ||||| ||| ||||||||||| || |||||||| ||||||||||| Sbjct 19326977 TCCTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATATTTTCATTAAT 19326918 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||| ||||||| |||| Sbjct 19326917 CA-AGAATGAAAGTTGGGGG 19326899 >seq9 Length=72259479 Score = 215 bits (238), Expect = 9e-54 Identities = 197/245 (80%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133 |||||||||| |||||||||| |||||||| ||| | |||| |||| ||||||||| Sbjct 24699902 TTACTTTGAAGAAATTAGAGTACTCAAAGCAAGCCATCGCTCTTGATACGTTAGCATGGG 24699843 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | ||| ||||| |||||| | ||| || |||||||||| Sbjct 24699842 ATAACATCATAGGAT-TCTGGTCCTATTGTGTTGGCCTTCGGGATCGGAATAATGATTAA 24699784 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || || |||||||||||||||||||||||| | Sbjct 24699783 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTATTAA 24699724 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||| ||||||||||| ||||||||||| Sbjct 24699723 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTCTTCATTAATCA-AGAACGAAAGTT 24699665 Query 314 AGGGG 318 |||| Sbjct 24699664 GGGGG 24699660 >seq432 Length=13724 Score = 201 bits (222), Expect = 2e-49 Identities = 182/225 (81%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 94 GTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 ||| |||||||| ||| | |||| | |||||||||||||| |||| | |||||| | | Sbjct 8006 GTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGAT-TCC 8064 Query 153 GGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212 ||| ||||| |||||| | ||| || ||||||||||||||| | |||| |||| | Sbjct 8065 GGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGCACAGTCAGGGGCAT 8124 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || |||||||||||||||||||||||||| ||||| ||| |||||||||| Sbjct 8125 TCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAG 8184 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 | || |||||||||||||||||||||| ||||||||||| ||| Sbjct 8185 CATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGG 8228 >seq733 Length=9930 Score = 149 bits (164), Expect = 1e-33 Identities = 151/193 (78%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTA 185 |||||||||||| ||||||||| | ||||||||||||||||| | || | || ||| Sbjct 700 GCATGGAATAATGGAATAGGACCTT-GGTTCTATTTTGTTGGTCTTAAGAATCCAAGGTA 642 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| || |||||| | ||||| | |||||||||||||||||| Sbjct 641 ATGATTAAGAGGGACAGACGGGGGCATTTGTATTGCGGCGCTAGAGGTGAAATTCTTGGA 582 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| |||||| |||||||| || ||||| |||||||||||||||| ||| Sbjct 581 CCGTCGCAAGACAAACTACAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 523 Query 306 CGAAAGTTAGGGG 318 |||||||||| || Sbjct 522 CGAAAGTTAGAGG 510 Score = 149 bits (164), Expect = 1e-33 Identities = 151/193 (78%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTA 185 |||||||||||| ||||||||| | ||||||||||||||||| | || | || ||| Sbjct 9787 GCATGGAATAATGGAATAGGACCTT-GGTTCTATTTTGTTGGTCTTAAGAATCCAAGGTA 9729 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| || |||||| | ||||| | |||||||||||||||||| Sbjct 9728 ATGATTAAGAGGGACAGACGGGGGCATTTGTATTGCGGCGCTAGAGGTGAAATTCTTGGA 9669 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| |||||| |||||||| || ||||| |||||||||||||||| ||| Sbjct 9668 CCGTCGCAAGACAAACTACAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 9610 Query 306 CGAAAGTTAGGGG 318 |||||||||| || Sbjct 9609 CGAAAGTTAGAGG 9597 >seq1290 Length=6132 Score = 80.6 bits (88), Expect = 5e-13 Identities = 63/74 (85%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 4966 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 5025 Query 134 ATAATAGAATAGGA 147 |||| | |||||| Sbjct 5026 ATAACATCATAGGA 5039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915125063424