Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10]
8,188 sequences; 553,845,420 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq5309 453 5e-125
seq250 197 6e-48
seq7 197 6e-48
seq4 165 3e-38
seq1290 161 4e-37
seq5 161 4e-37
seq3493 156 2e-35
seq3 143 1e-31
seq733 136 2e-29
>seq5309
Length=1492
Score = 453 bits (502), Expect = 5e-125
Identities = 327/373 (88%), Gaps = 6/373 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122 TGTAAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 1181
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1182 TTCTTCTAAAGCTAAATATTGGCGAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1241
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 1301
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262
|||| |||||||| | || || |||| | | ||||| |||| | ||
Sbjct 1302 GCAATCAGACTTG-TTTAAACTGTTCGGCCGGTCTTCTGACCGGTTTACTC-AGTTTGGA 1359
Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC--CCCCTTCG- 319
|||||||||||||| | ||||| ||||||||||| | ||||||||||| || |||||
Sbjct 1360 CAGGCCAGCATCAGTTTCGGCGGCCGGATAAAGGCTCTGGGAATGTGGCCTCCACTTCGG 1419
Query 320 -GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|| ||||||||||||| | ||| ||| ||||| ||| ||||||||||||||||| ||||
Sbjct 1420 TGGAGGTGTTATAGCCCAGTGTGTAATACGGCCAGCCGGGACTGAGGTCCGCGCTTCGGC 1479
Query 379 TAGGATGCTGGCG 391
|||||||||||||
Sbjct 1480 TAGGATGCTGGCG 1492
>seq250
Length=19229
Score = 197 bits (218), Expect = 6e-48
Identities = 217/283 (77%), Gaps = 7/283 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|| ||||||||| ||||||||||||||||||| |||| ||||||| |||| | |
Sbjct 397 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGCGTGCGAGTCGACGGGTTCTTA 338
Query 464 AACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG--GGTGCACCATCG 520
|||| | | ||| || ||| ||| ||| |||| || | | | ||||| |
Sbjct 337 AACCTGGGATGCGCAAGGAAGCTGAC--GAGC-GGGAGGCCCTCACAAGCCGCACCGCTG 281
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||| |||||| | | || || || |||| ||||| |||| |||||||||||||
Sbjct 280 GCCGACCCTGATCTTCTGTGAAGGGTTCGAGTTGGAGCACGCCTGTCGGGACCCGAAAGA 221
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct 220 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGAAGCGA 161
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 160 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 118
Score = 156 bits (172), Expect = 2e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 785 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 726
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 725 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 666
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 665 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 612
>seq7
Length=46770411
Score = 197 bits (218), Expect = 6e-48
Identities = 217/283 (77%), Gaps = 7/283 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|| ||||||||| ||||||||||||||||||| |||| ||||||| |||| | |
Sbjct 1041669 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGCGTGCGAGTCGACGGGTTCTTA 1041610
Query 464 AACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG--GGTGCACCATCG 520
|||| | | ||| || ||| ||| ||| |||| || | | | ||||| |
Sbjct 1041609 AACCTGGGATGCGCAAGGAAGCTGAC--GAGC-GGGAGGCCCTCACAAGCCGCACCGCTG 1041553
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||| |||||| | | || || || |||| ||||| |||| |||||||||||||
Sbjct 1041552 GCCGACCCTGATCTTCTGTGAAGGGTTCGAGTTGGAGCACGCCTGTCGGGACCCGAAAGA 1041493
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct 1041492 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGAAGCGA 1041433
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 1041432 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1041390
Score = 192 bits (212), Expect = 2e-46
Identities = 216/283 (76%), Gaps = 7/283 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|| ||||||||| ||||||||||||||||||| |||| ||||||| |||| | |
Sbjct 1003097 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGCGTGCGAGTCGACGGGTTCTTA 1003038
Query 464 AACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG--GGTGCACCATCG 520
|||| | | ||| || ||| ||| ||| |||| || | | | ||||| |
Sbjct 1003037 AACCTGGGATGCGCAAGGAAGCTGAC--GAGC-GGGAGGCCCTCACAAGCCGCACCGCTG 1002981
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||| | |||| | | || || || |||| ||||| |||| |||||||||||||
Sbjct 1002980 GCCGACCTTGATCTTCTGTGAAGGGTTCGAGTTGGAGCACGCCTGTCGGGACCCGAAAGA 1002921
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct 1002920 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGAAGCGA 1002861
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| ||||||||||| ||||| | ||||||||||||||||
Sbjct 1002860 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1002818
Score = 188 bits (208), Expect = 3e-45
Identities = 215/283 (76%), Gaps = 7/283 (2%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|| ||||||||| ||||||||||||||||||| |||| ||||||| |||| | |
Sbjct 4654155 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGCGTGCGAGTTGACGGGTTCTTA 4654214
Query 464 AACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG--GGTGCACCATCG 520
|||| | | ||| || ||| ||| ||| |||| || | | | ||||| |
Sbjct 4654215 AACCTGGGATGCGCAAGGAAGCTGAC--GAGC-GGGAGGCCCTCACAAGCCGCACCGCTG 4654271
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||| |||||| | | || || || |||| ||||| |||| |||||||||||||
Sbjct 4654272 GCCGACCCTGATCTTCTATGAAGGGTTCGAGTTGGAGCACGCCTGTCGGGACCCGAAAGA 4654331
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct 4654332 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGAAGCGA 4654391
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| |||||||||| ||||| | ||||||||||||| ||
Sbjct 4654392 TACTGATGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGAGA 4654434
Score = 168 bits (186), Expect = 3e-39
Identities = 209/280 (75%), Gaps = 7/280 (3%)
Strand=Plus/Plus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCAAAC 466
||||||||| ||||||||||||||||||| |||| ||||||| |||| | ||||
Sbjct 4680360 CCCGTCTTGAAACACGGACCAAGGAGTCTGACATGCGTGCGAGTCGACGGGTTCTTAAAC 4680419
Query 467 CCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG--GGTGCACCATCGACC 523
| | | ||| || ||| ||| ||| |||| || | | | ||||| ||
Sbjct 4680420 CTGGGATGCGCAAGGAAGCTGAC--GAGC-GGGAGGCCCTCACAAGCCGCACCGCTTCCC 4680476
Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583
|| ||| || | | || || || |||| |||| | || ||||||||||||||||
Sbjct 4680477 GACCCTAATCTTCTGTGAAGGGTTCGAGTTGGAGCCCGCCAGTCGGGACCCGAAAGATGG 4680536
Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643
|||||||||||||| |||| ||||| ||||||||||||||||||||||| |||| | |
Sbjct 4680537 TGAACTATGCCTGAGCAGGGCGAAGCTAGAGGAAACTCTGGTGGAGGCTCCAAGCGATAC 4680596
Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| ||||||||| | ||||| | ||||||||||||||||
Sbjct 4680597 TGACGTGCAAATTGTTCGTCTGACTTGGGTATAGGGGCGA 4680636
Score = 165 bits (182), Expect = 3e-38
Identities = 196/260 (75%), Gaps = 7/260 (3%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|| ||||||||| ||||||||||||||||||| |||| ||||||| |||| | |
Sbjct 4684942 CGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGCGTGCGAGTCGACGGGTTCTTA 4684883
Query 464 AACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG--GGTGCACCATCG 520
|||| | ||| || ||| ||| ||| |||| || | | | ||||| |
Sbjct 4684882 AACCTAGGATGCGCAAGGAAGCTGAC--GAGC-GGGAGGCCCTCACAAGCCGCACCGCTG 4684826
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||| |||||| | | || || || |||| ||||| |||| |||||||||||||
Sbjct 4684825 GCCGACCCTGATCTTCTGTGAAGGGTTCGAGTTGGAGCACGCCTGTCGGGACCCGAAAGA 4684766
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||
Sbjct 4684765 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGAAGCGA 4684706
Query 641 TTCTGGCGTGCAAATCGATC 660
| ||| ||||||||||| ||
Sbjct 4684705 TACTGACGTGCAAATCGTTC 4684686
Score = 165 bits (182), Expect = 3e-38
Identities = 209/280 (75%), Gaps = 8/280 (3%)
Strand=Plus/Plus
Query 405 CGGCCCGTCTTGGAA-CACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TC 462
|| ||||||||| || |||||| |||||||||| |||| ||||||| |||| |
Sbjct 25852227 CGACCCGTCTTGAAAACACGGAGCAAGGAGTCTGACATGAGTGCGAGTCGACGGGTTCTT 25852286
Query 463 AAACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAG--GGTGCACCATC 519
||||| | | ||| || ||| ||| ||| |||| || | | | |||||
Sbjct 25852287 AAACCTGGGATGCGCAAGGAAGCTGAC--GAGC-GGGAGGCCCTCACAAGCCGCACCGCT 25852343
Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579
| |||| |||||| | | || || || |||| ||||| | |||||||||||| ||||
Sbjct 25852344 GGCCGACCCTGATCTTCTGTGAAGGGTTCGAGTTGGAGCACACCTGTTGGGACCCAAAAG 25852403
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
|||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||
Sbjct 25852404 ATGGTGAACTATGCCTGAGCGGGGGGAAGCAAGAGGAAACTCTGGTGGAGGCTCAAAGCG 25852463
Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
| ||| | ||||||||| ||| | | ||||||||||||
Sbjct 25852464 ATACTGACATGCAAATCGTTCGCCTGACTTGGGTATAGGG 25852503
Score = 161 bits (178), Expect = 4e-37
Identities = 140/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || |||| |||||| | |
Sbjct 1866560 GAGGCACCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATTGGGCGGTAAACTCC 1866501
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 1866500 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 1866441
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 1866440 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 1866387
Score = 158 bits (174), Expect = 5e-36
Identities = 138/172 (80%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571
||||| | | |||| |||||| | | || || || |||| ||||| |||| ||||
Sbjct 2184011 GCACCGTTGGCCGACCCTGATCTTCTGTGAAGGGTTCGAGTTGGAGCACGCCTGTCGGGA 2184070
Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631
|| |||||||||||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct 2184071 CCTGAAAGATGGTGAACTATGCCCGAGCGGGGTGAAGCCGGAGGAAACTCTGGTGGAGGC 2184130
Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| |||| | ||| |||||||||| ||||| | ||||||||||||| ||
Sbjct 2184131 TCGAAGCGATACTGACGTGCAAATCATTCGTCTGACTTGGGTATAGGGGTGA 2184182
Score = 158 bits (174), Expect = 5e-36
Identities = 134/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|| |||||||| |||||||||||||||||| | || ||| |||||| | | || || ||
Sbjct 4653777 TCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGC 4653836
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| ||| |||||||||||||| ||||||| | || ||||||||||||| ||||
Sbjct 4653837 TAAATATAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 4653896
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 4653897 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 4653941
Score = 156 bits (172), Expect = 2e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 1003485 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 1003426
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 1003425 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 1003366
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 1003365 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 1003312
Score = 156 bits (172), Expect = 2e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 1042057 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 1041998
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 1041997 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 1041938
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 1041937 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 1041884
Score = 156 bits (172), Expect = 2e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 1916241 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 1916182
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 1916181 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 1916122
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 1916121 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 1916068
Score = 145 bits (160), Expect = 3e-32
Identities = 133/168 (79%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
|| || |||||||| |||||||||||||||||| | || ||| |||||| | | || ||
Sbjct 25851845 CCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCATCCAA 25851904
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||||||| ||| |||||||||||||| ||||||| || ||||||||||||| |
Sbjct 25851905 GGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCACGAGGGAAAGATGAAAAGGA 25851964
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||| ||||||||| ||| || | |||||| | | |||||||||
Sbjct 25851965 CTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATCGCCGGGAGGGAAGCG 25852012
Score = 143 bits (158), Expect = 1e-31
Identities = 136/174 (78%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 4679969 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 4680028
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| ||||||| |||||| |||||| || |||||||||
Sbjct 4680029 GTCCAAGGCTAAATACAGGCGAGAGACCAATAGCGAACAAGTGCCACGAGGGAAAGATGA 4680088
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 4680089 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGCGAGGGAAGCG 4680142
Score = 82.4 bits (90), Expect = 3e-13
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
|| || |||||||| |||||||||||||||||| | || ||| |||||| | | || ||
Sbjct 4690728 CCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCATCCAA 4690669
Query 92 AGCTAAATATTGGCCAGAGACCGATAGC 119
|||||||| ||| |||||| ||||||
Sbjct 4690668 GGCTAAATACAGGCGAGAGACTGATAGC 4690641
>seq4
Length=49548238
Score = 165 bits (182), Expect = 3e-38
Identities = 210/283 (74%), Gaps = 7/283 (2%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463
|| ||||||||| |||||| ||| |||||||| |||| ||||||| |||| | |
Sbjct 45117025 CGACCCGTCTTGAAACACGAACCTAGGAGTCTGACATGCGTGCGAGTCGACGGGTTCTTA 45116966
Query 464 AACCCGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA--GGGTGCACCATCG 520
|||| | | ||| || ||| | ||| | | |||| || | | || |||| |
Sbjct 45116965 AACCTGGGATGCGCAAGGAAGCT-AAC--AAGCGGGAGGCCCTCATAGGCCGCACTGCTG 45116909
Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||| |||||| | | || || || |||| ||||| | |||| |||||| ||||||
Sbjct 45116908 GCCGACCCTGATCTTCTGTGAAGGGTTCGAGTTGGAGCACACCTGTCGGGACCTGAAAGA 45116849
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
|||| |||||||||| | | | |||||||||||||||||||||||||||| | ||||
Sbjct 45116848 TGGTAAACTATGCCTAAGCGGCGCGAAGCCAGAGGAAACTCTGGTGGAGGCTTGAAGCGA 45116789
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||| |||||||||| ||||| | ||||||||||||||||
Sbjct 45116788 TACTGACGTGCAAATCATTCGTCTGACTTGGGTATAGGGGCGA 45116746
Score = 156 bits (172), Expect = 2e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 45117413 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 45117354
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| |||| |||||||||
Sbjct 45117353 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGA 45117294
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| || ||| || |||||| ||| || | ||||||||| | |||||||||
Sbjct 45117293 AAAGGACATTGAAACGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 45117240
>seq1290
Length=6132
Score = 161 bits (178), Expect = 4e-37
Identities = 140/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 2115 GAGGCACCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 2174
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 2175 GTCCAACGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGAGAAAGATGA 2234
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||||||| || | |||||||| | |||||||||
Sbjct 2235 AAAGGACTTTGAAAAGAGAGTTAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 2288
>seq5
Length=59822759
Score = 161 bits (178), Expect = 4e-37
Identities = 140/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 47004830 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 47004889
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || ||||||||| || |||||||||||||| ||||||| |||| |||||||||
Sbjct 47004890 GTCCAAGGCTAAATATAGGTGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGA 47004949
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||||||| || | ||||||| | |||||||||
Sbjct 47004950 AAAGGACTTTGAAAAGAGAGTTAAAGAGTGCTTGAAATTACCGGGAGGGAAGCG 47005003
Score = 152 bits (168), Expect = 2e-34
Identities = 138/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| | |||| | |
Sbjct 56392184 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGATAAACTCC 56392243
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 56392244 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 56392303
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 56392304 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 56392357
>seq3493
Length=2198
Score = 156 bits (172), Expect = 2e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 1525 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 1584
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 1585 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 1644
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 1645 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 1698
>seq3
Length=64463019
Score = 143 bits (158), Expect = 1e-31
Identities = 136/174 (78%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 19329147 GAGGCACCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 19329206
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||| ||||| ||||||| || |||||||||
Sbjct 19329207 GTCCAAGGCTAAATACAGGCGAGAGACCGGTAGCGAACAAGTACCACGAGGGAAAGATGA 19329266
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | ||||||| | |||||||||
Sbjct 19329267 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTTCCGGGAGGGAAGCG 19329320
>seq733
Length=9930
Score = 136 bits (150), Expect = 2e-29
Identities = 107/128 (84%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|| ||| |||| | |||||||||||||||||||| ||| | | | | ||||||||||||
Sbjct 6367 AGTATATATGTTAGTACCCGAAAGATGGTGAACTAAGCCCGGACAAGATGAAGCCAGAGG 6308
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
||||||||||||||| | |||| ||||| |||||||||||||||||| || |||| |
Sbjct 6307 AAACTCTGGTGGAGGTCTGTAGCGATTCTGACGTGCAAATCGATCGTCAGATCCGGGTTT 6248
Query 676 AGGGGCGA 683
||||||||
Sbjct 6247 AGGGGCGA 6240
Score = 80.6 bits (88), Expect = 1e-12
Identities = 106/145 (73%), Gaps = 4/145 (3%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| ||| ||| || |||| | || ||||||||||| | || | || ||||||
Sbjct 7272 GAGTCAGATTGCTTGAGAGTGCAATCCAAATTGGGAGGTAAACTCCTCCCAAGACTAAAT 7213
Query 100 A--TTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157
| ||| | | ||||||| ||||||| |||| ||||| || |||| ||||||
Sbjct 7212 ACGATGG--TAATATCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGTACTTTGA 7155
Query 158 AAAGAGAGTTAAAAAGCACGTGAAA 182
| |||||||| ||||| ||||||||
Sbjct 7154 AGAGAGAGTTCAAAAGGACGTGAAA 7130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079824367400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |